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Protein
Homologs
Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS22225 and BWI76_RS22230 are separated by 17 nucleotides
BWI76_RS22230 and BWI76_RS22235 are separated by 133 nucleotides
BWI76_RS22235 and BWI76_RS22240 are separated by 68 nucleotides
BWI76_RS22240 and BWI76_RS22245 overlap by 8 nucleotides
BWI76_RS22225: BWI76_RS22225 - PTS sorbitol transporter subunit IIA, at 4,633,675 to 4,634,037
_RS22225
BWI76_RS22230: BWI76_RS22230 - Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
(from data)
, at 4,634,055 to 4,634,834
_RS22230
BWI76_RS22235: BWI76_RS22235 - transcriptional regulator GutM, at 4,634,968 to 4,635,327
_RS22235
BWI76_RS22240: BWI76_RS22240 - transcriptional regulator, at 4,635,396 to 4,636,169
_RS22240
BWI76_RS22245: BWI76_RS22245 - arabinose 5-phosphate isomerase GutQ, at 4,636,162 to 4,637,127
_RS22245
Group
Condition
BWI76
_RS22225
BWI76
_RS22230
BWI76
_RS22235
BWI76
_RS22240
BWI76
_RS22245
carbon source
D-Sorbitol (C)
-3.8
-4.0
-1.1
+0.7
+0.4
carbon source
D-Sorbitol (C)
-3.0
-4.7
-0.4
+0.8
+0.1
rhizosphere
rhizosphere EcoFAB sample 3; outgrowth in LB
+0.2
-0.1
+0.7
-7.3
-0.2
carbon source
D-Alanine (C)
+0.0
-0.3
+0.0
-5.7
+0.3
carbon source
D-Alanine (C)
-0.4
-0.2
+0.1
-5.2
+0.2
carbon source
L-Glutamine (C)
-0.0
-0.1
-0.4
-4.4
-0.1
carbon source
succinate (C)
+0.1
-0.2
-0.1
-4.3
+0.0
carbon source
succinate (C)
+0.1
-0.1
-0.1
-4.2
-0.1
carbon source
Inosine (C)
-0.5
-0.2
-0.4
-2.2
+0.1
carbon source
D-Ribose (C)
+0.2
-0.4
-1.1
-2.0
+0.2
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.0
+0.0
-0.1
-2.9
-0.0
rhizosphere
rhizosphere sample 1; outgrowth in LB
+0.5
-0.1
+0.6
-4.4
+0.3
carbon source
Inosine (C)
+0.1
-0.3
-0.2
-2.6
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.4
-0.7
-1.3
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
-0.3
+0.9
-1.4
-1.5
-0.1
carbon source
D-Lactate (C)
-0.2
-0.3
+0.2
-2.4
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
-0.2
-0.2
-0.3
-1.9
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
-0.3
-0.5
-1.5
+0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+0.2
+0.3
-0.4
-1.8
-0.4
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
-0.7
+0.3
-2.0
+0.4
carbon source
D-Lactate (C)
+0.4
-0.0
-0.2
-2.1
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.4
+0.9
-1.3
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
+0.3
+0.1
+0.7
-1.8
-0.3
phage
KLEB30 MOI 1
-0.8
-0.6
+1.4
-0.4
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
-0.2
+0.9
+0.2
-1.8
+1.0
phage
KLEB30 MOI 1
-0.4
-0.2
+1.7
-0.3
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
-0.2
+2.6
-1.5
+0.4
phage
B3 MOi 1
-0.3
-0.1
+1.4
+0.7
-0.5
carbon source
D,L-Malic Acid (C)
-0.0
-0.4
-0.6
+2.6
+0.4
carbon source
D,L-Malic Acid (C)
+0.1
-0.3
-0.1
+2.7
+0.1
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