Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS22225 and BWI76_RS22230 are separated by 17 nucleotidesBWI76_RS22230 and BWI76_RS22235 are separated by 133 nucleotidesBWI76_RS22235 and BWI76_RS22240 are separated by 68 nucleotidesBWI76_RS22240 and BWI76_RS22245 overlap by 8 nucleotides BWI76_RS22225: BWI76_RS22225 - PTS sorbitol transporter subunit IIA, at 4,633,675 to 4,634,037 _RS22225 BWI76_RS22230: BWI76_RS22230 - Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) (from data), at 4,634,055 to 4,634,834 _RS22230 BWI76_RS22235: BWI76_RS22235 - transcriptional regulator GutM, at 4,634,968 to 4,635,327 _RS22235 BWI76_RS22240: BWI76_RS22240 - transcriptional regulator, at 4,635,396 to 4,636,169 _RS22240 BWI76_RS22245: BWI76_RS22245 - arabinose 5-phosphate isomerase GutQ, at 4,636,162 to 4,637,127 _RS22245
Group Condition BWI76_RS22225 BWI76_RS22230 BWI76_RS22235 BWI76_RS22240 BWI76_RS22245
carbon source D-Sorbitol (C) -3.8 -4.0 -1.1 +0.7 +0.4
carbon source D-Sorbitol (C) -3.0 -4.7 -0.4 +0.8 +0.1
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB +0.2 -0.1 +0.7 -7.3 -0.2
carbon source D-Alanine (C) +0.0 -0.3 +0.0 -5.7 +0.3
carbon source D-Alanine (C) -0.4 -0.2 +0.1 -5.2 +0.2
carbon source L-Glutamine (C) -0.0 -0.1 -0.4 -4.4 -0.1
carbon source succinate (C) +0.1 -0.2 -0.1 -4.3 +0.0
carbon source succinate (C) +0.1 -0.1 -0.1 -4.2 -0.1
carbon source Inosine (C) -0.5 -0.2 -0.4 -2.2 +0.1
carbon source D-Ribose (C) +0.2 -0.4 -1.1 -2.0 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.0 +0.0 -0.1 -2.9 -0.0
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 -0.1 +0.6 -4.4 +0.3
carbon source Inosine (C) +0.1 -0.3 -0.2 -2.6 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.4 -0.7 -1.3 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 +0.9 -1.4 -1.5 -0.1
carbon source D-Lactate (C) -0.2 -0.3 +0.2 -2.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 -0.2 -0.3 -1.9 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -0.3 -0.5 -1.5 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2 +0.3 -0.4 -1.8 -0.4
carbon source D-Glucosamine Hydrochloride (C) +0.1 -0.7 +0.3 -2.0 +0.4
carbon source D-Lactate (C) +0.4 -0.0 -0.2 -2.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 +0.4 +0.9 -1.3 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +0.1 +0.7 -1.8 -0.3
phage KLEB30 MOI 1 -0.8 -0.6 +1.4 -0.4 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 +0.9 +0.2 -1.8 +1.0
phage KLEB30 MOI 1 -0.4 -0.2 +1.7 -0.3 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -0.2 +2.6 -1.5 +0.4
phage B3 MOi 1 -0.3 -0.1 +1.4 +0.7 -0.5
carbon source D,L-Malic Acid (C) -0.0 -0.4 -0.6 +2.6 +0.4
carbon source D,L-Malic Acid (C) +0.1 -0.3 -0.1 +2.7 +0.1
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