Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS22045	BWI76_RS22050	BWI76_RS22055	BWI76_RS22060	BWI76_RS22065
supernatant	Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-1.8	-1.6	-1.5	-0.0
stress	Cobalt chloride 0.5 mM	N.D.	-1.9	-1.7	-0.8	-0.0
supernatant	Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-1.5	-1.5	-1.5	+0.1
stress	Nickel (II) chloride 1.5 mM	N.D.	-1.5	-1.2	-1.2	+0.0
stress	Cobalt chloride 0.5 mM	N.D.	-1.1	-1.6	-0.8	-0.2
stress	Nickel (II) chloride 1.5 mM	N.D.	-0.9	-1.3	-1.2	+0.1
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-1.2	-1.0	-0.9	-0.0
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-1.1	-0.7	-0.7	-0.1
stress	RCH2_defined_glucose with 2,2'-Dipyridyl 400 uM	N.D.	-0.6	-0.5	-0.5	+0.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-0.6	-0.4	-0.6	+0.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	N.D.	-0.6	-0.3	-0.6	+0.1
stress	RCH2_defined_glucose with 2,2'-Dipyridyl 400 uM	N.D.	-0.5	-0.4	-0.5	+0.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x	N.D.	-0.6	-0.4	-0.4	+0.0
phage	KLEB15 MOI 10	N.D.	-1.0	-0.2	-0.3	+0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-0.7	-0.3	-0.3	-0.0
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL	N.D.	-0.5	-0.3	-0.4	+0.0
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL	N.D.	-0.5	-0.3	-0.4	-0.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x	N.D.	-0.3	-0.3	-0.5	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.8	-0.3	+0.1	-0.0
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	-0.9	+0.2	+0.2	-0.0
phage	K. M5a1 KLEB10 MOI 10	N.D.	-1.0	+0.3	+0.1	+0.1
phage	K. M5a1 KLEB23 MOI 10	N.D.	-0.7	+0.3	+0.2	-0.1
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	N.D.	+0.4	-0.3	-0.5	+0.0
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	N.D.	+0.9	-0.1	-0.8	-0.3
nitrogen source	Uridine (N)	N.D.	+0.7	-0.3	+0.1	-0.1
nitrogen source	Thymine (N)	N.D.	+1.4	-0.3	+0.1	-0.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	N.D.	+1.3	-0.0	-0.1	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+1.3	+0.1	-0.2	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+1.8	+0.1	+0.1	+0.4
carbon source	Gly-Glu (C)	N.D.	+3.7	+0.5	-0.3	+0.3