Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS21870	BWI76_RS21875	BWI76_RS21880	BWI76_RS21885	BWI76_RS21890
nitrogen source	Uridine (N)	-1.2	-0.1	-1.3	-0.3	-0.4
nitrogen source	Uridine (N)	-1.9	-0.5	+0.0	+0.4	-0.5
nitrogen source	L-Lysine (N)	-1.7	-0.2	-0.1	+0.1	-0.3
nitrogen source	Glucuronamide (N)	-1.1	-0.1	-0.1	-0.4	-0.3
nitrogen source	L-Phenylalanine (N)	-1.7	-0.4	-0.3	+0.5	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-1.8	-0.1	+0.1	+0.4	-0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-1.5	-0.2	+0.2	+0.4	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.6	-0.4	-0.4	-0.7	-0.5
phage	KLEB17 MOI 1	-0.4	+0.4	-0.1	-0.3	-0.8
nitrogen source	L-Tryptophan (N)	-1.0	-0.3	+0.2	-0.2	+0.3
nitrogen source	nitrate (N)	-0.9	-1.0	+0.2	-0.0	+0.7
phage	K. M5a1 KLEB26 MOI 0.1	-0.6	-0.1	-0.8	+0.6	-0.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.5	+0.2	-1.0	+0.1	+0.3
nitrogen source	L-Cysteine (N)	-0.5	-0.6	+0.2	+0.4	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.5	-0.2	+0.1	+0.9	+0.3
nitrogen source	Thymidine (N)	-0.7	-0.5	-0.0	+0.2	+0.8
supernatant control	Vogels_fungal_media 0.1X	-0.3	+0.2	+0.2	+0.5	-0.8
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-1.0	+0.2	+0.0	+0.7	+0.1
nitrogen source	L-Histidine (N)	+0.2	-0.3	+0.5	+0.4	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7	-0.1	-0.3	-0.4	+0.6
stress	Sisomicin 0.008 mg/ml	+1.2	-0.5	+0.4	-0.7	+0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.1	+0.3	-0.5	+0.5	+0.6
nitrogen source	Gly-DL-Asp (N)	-0.5	+0.2	+0.4	+0.5	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.5	+0.3	+0.3	+1.0	-0.0
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.4	+0.1	+0.2	+0.4	+1.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+0.4	-0.3	+0.7	+0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	+0.2	+0.1	-0.1	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	+0.6	-0.1	-0.4	+1.7
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	+0.6	+0.3	+0.7	+0.7	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.6	+0.4	-0.4	+0.3	+1.5