Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS21575 and BWI76_RS21580 are separated by 110 nucleotidesBWI76_RS21580 and BWI76_RS21590 are separated by 712 nucleotidesBWI76_RS21590 and BWI76_RS21595 are separated by 139 nucleotidesBWI76_RS21595 and BWI76_RS21600 are separated by 175 nucleotides BWI76_RS21575: BWI76_RS21575 - hypothetical protein, at 4,515,548 to 4,516,024 _RS21575 BWI76_RS21580: BWI76_RS21580 - SsrA-binding protein, at 4,516,135 to 4,516,617 _RS21580 BWI76_RS21590: BWI76_RS21590 - integrase, at 4,517,330 to 4,518,571 _RS21590 BWI76_RS21595: BWI76_RS21595 - hypothetical protein, at 4,518,711 to 4,519,019 _RS21595 BWI76_RS21600: BWI76_RS21600 - IS3 family transposase, at 4,519,195 to 4,520,306 _RS21600
Group Condition BWI76_RS21575 BWI76_RS21580 BWI76_RS21590 BWI76_RS21595 BWI76_RS21600
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB N.D. -4.7 -0.3 -0.4 N.D.
nitrogen source nitrate (N) N.D. -5.0 +0.1 -0.1 N.D.
nitrogen source L-Lysine (N) N.D. -5.1 +0.0 +0.0 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -4.0 +0.0 -0.5 N.D.
stress RCH2_defined_1percent_glucose with Chloride 600 mM N.D. -4.1 -0.2 -0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -4.1 -0.2 -0.1 N.D.
supernatant control Vogels_fungal_media; pH 5.5 N.D. -4.1 +0.0 +0.1 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. -4.2 +0.1 +0.1 N.D.
phage KLEB1 MOI 0.1 N.D. -3.6 -0.1 -0.0 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -3.7 +0.0 -0.1 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL N.D. -3.3 -0.2 -0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -3.4 -0.0 -0.2 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. -2.8 -0.2 -0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -3.5 -0.0 -0.0 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. -2.8 -0.1 -0.6 N.D.
phage KLEB20 MOI 0.1 N.D. -2.8 -0.3 -0.5 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. -2.7 -0.3 -0.5 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. -2.8 -0.1 -0.4 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. -2.6 -0.1 -0.7 N.D.
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. -2.6 -0.1 -0.6 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. -2.6 -0.1 -0.6 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -3.4 +0.4 -0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -3.4 +0.4 -0.1 N.D.
phage K. M5a1 KLEB26 MOI 0.1 N.D. -3.5 +0.1 +0.4 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -3.2 +0.1 -0.0 N.D.
phage K. M5a1 KLEB22 MOI 0.1 N.D. -2.9 +0.2 -0.2 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. -3.2 -0.1 +0.4 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB N.D. -2.8 -0.1 +0.5 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X N.D. -2.9 +0.2 +0.5 N.D.
phage KLEB26 MOI0.1 N.D. -2.7 +0.2 +0.4 N.D.
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BWI76_RS21575
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