Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS21515 and BWI76_RS21520 are separated by 46 nucleotidesBWI76_RS21520 and BWI76_RS21525 are separated by 18 nucleotidesBWI76_RS21525 and BWI76_RS21530 are separated by 215 nucleotidesBWI76_RS21530 and BWI76_RS21535 are separated by 164 nucleotides BWI76_RS21515: BWI76_RS21515 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 4,505,830 to 4,506,597 _RS21515 BWI76_RS21520: BWI76_RS21520 - ribosome maturation factor RimM, at 4,506,644 to 4,507,192 _RS21520 BWI76_RS21525: BWI76_RS21525 - 30S ribosomal protein S16, at 4,507,211 to 4,507,459 _RS21525 BWI76_RS21530: BWI76_RS21530 - signal recognition particle protein, at 4,507,675 to 4,509,042 _RS21530 BWI76_RS21535: BWI76_RS21535 - inner membrane protein YpjD, at 4,509,207 to 4,509,998 _RS21535
Group Condition BWI76_RS21515 BWI76_RS21520 BWI76_RS21525 BWI76_RS21530 BWI76_RS21535
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB N.D. N.D. N.D. N.D. -5.7
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. N.D. N.D. N.D. -2.4
phage KLEB1 MOI 10 N.D. N.D. N.D. N.D. -1.6
nitrogen source L-tyrosine (N) N.D. N.D. N.D. N.D. -1.4
stress Sisomicin 0.008 mg/ml N.D. N.D. N.D. N.D. -1.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X N.D. N.D. N.D. N.D. -1.3
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X N.D. N.D. N.D. N.D. -1.3
mixed community LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. N.D. -1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. N.D. N.D. N.D. -1.3
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X N.D. N.D. N.D. N.D. -1.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X N.D. N.D. N.D. N.D. -1.2
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X N.D. N.D. N.D. N.D. -1.2
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. N.D. -1.1
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X N.D. N.D. N.D. N.D. -1.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X N.D. N.D. N.D. N.D. -1.1
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL N.D. N.D. N.D. N.D. -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. N.D. N.D. -1.0
micoeukaryotes Tetrahymena sp., Mixed culture-1 N.D. N.D. N.D. N.D. -1.0
stress Nickel (II) chloride 1.5 mM N.D. N.D. N.D. N.D. -0.9
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x N.D. N.D. N.D. N.D. -0.9
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. N.D. -0.9
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x N.D. N.D. N.D. N.D. -0.8
stress Cobalt chloride 0.5 mM N.D. N.D. N.D. N.D. +0.9
stress Cobalt chloride 0.5 mM N.D. N.D. N.D. N.D. +0.9
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL N.D. N.D. N.D. N.D. +0.9
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL N.D. N.D. N.D. N.D. +0.9
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL N.D. N.D. N.D. N.D. +1.1
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL N.D. N.D. N.D. N.D. +1.1
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. N.D. +1.2
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. N.D. +1.3
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BWI76_RS21515
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BWI76_RS21535
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