Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS21390 and BWI76_RS21395 are separated by 69 nucleotidesBWI76_RS21395 and BWI76_RS21400 are separated by 35 nucleotidesBWI76_RS21400 and BWI76_RS21405 are separated by 93 nucleotidesBWI76_RS21405 and BWI76_RS21410 are separated by 39 nucleotides BWI76_RS21390: BWI76_RS21390 - thiol disulfide reductase thioredoxin, at 4,477,662 to 4,478,087 _RS21390 BWI76_RS21395: BWI76_RS21395 - DTW domain-containing protein, at 4,478,157 to 4,478,855 _RS21395 BWI76_RS21400: BWI76_RS21400 - protein lysine acetyltransferase, at 4,478,891 to 4,481,569 _RS21400 BWI76_RS21405: BWI76_RS21405 - phosphatidylserine synthase, at 4,481,663 to 4,483,018 _RS21405 BWI76_RS21410: BWI76_RS21410 - lipoprotein, at 4,483,058 to 4,483,384 _RS21410
Group Condition BWI76_RS21390 BWI76_RS21395 BWI76_RS21400 BWI76_RS21405 BWI76_RS21410
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.6 -2.7 -0.4 N.D. +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.2 -0.1 N.D. -0.8
carbon source RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x -0.2 -1.9 +0.3 N.D. -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -1.2 +0.1 N.D. -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.0 +0.1 N.D. -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -1.4 +0.1 N.D. -1.0
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.1 -0.9 -0.5 N.D. +0.3
phage KLEB17 MOI 1 +0.4 -1.9 +0.1 N.D. -0.3
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -0.6 +0.5 +0.2 N.D. -1.7
carbon source D-Salicin (C) +0.2 -1.2 +0.4 N.D. -0.9
stress Nickel (II) chloride 1.5 mM -0.5 -1.3 +0.0 N.D. +0.5
phage K. M5a1 KLEB23 MOI 10 -0.5 +0.6 -0.2 N.D. -1.0
nitrogen source L-Lysine (N) -0.8 -1.1 +0.2 N.D. +0.6
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.6 -2.1 -0.2 N.D. +0.7
phage KLEB15 MOI 0.1 +0.9 -1.2 +0.0 N.D. -0.5
phage KLEB30 MOI 1 +0.7 -1.5 -0.0 N.D. +0.2
stress copper (II) chloride 2 mM -0.5 -1.0 +0.1 N.D. +0.9
nitrogen source N-Acetyl-D-glucosamine (N) +0.2 -1.7 +0.4 N.D. +0.9
phage KLEB30 MOI 1 +1.2 -1.1 +0.2 N.D. -0.5
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL +1.1 -0.3 +0.3 N.D. -0.7
stress Paraquat dichloride 0.1 mg/ml +1.2 +0.6 -0.1 N.D. -1.0
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml +0.8 +1.3 -0.3 N.D. -1.1
phage KLEB29 MOI 0.1 +1.5 -0.5 +0.2 N.D. -0.3
carbon source Gly-Glu (C) +0.8 -0.5 -0.2 N.D. +0.9
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +1.0 +0.9 -0.1 N.D. -0.7
nitrogen source Gly-DL-Asp (N) -0.9 +0.5 +0.3 N.D. +1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.8 +1.1 -0.1 N.D. -0.4
phage K. M5a1 KLEB26 MOI 0.1 +1.0 -0.9 +0.6 N.D. +1.0
ecofab LB in EcoFAB_3.5mL -0.5 +0.3 +0.2 N.D. +1.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 +2.3 -0.3 N.D. +0.9
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