Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS21220 and BWI76_RS21225 are separated by 55 nucleotidesBWI76_RS21225 and BWI76_RS21230 overlap by 14 nucleotidesBWI76_RS21230 and BWI76_RS21235 overlap by 15 nucleotidesBWI76_RS21235 and BWI76_RS21240 overlap by 56 nucleotides BWI76_RS21220: BWI76_RS21220 - membrane protein, at 4,445,144 to 4,445,566 _RS21220 BWI76_RS21225: BWI76_RS21225 - serine hydroxymethyltransferase, at 4,445,622 to 4,446,875 _RS21225 BWI76_RS21230: BWI76_RS21230 - hypothetical protein, at 4,446,862 to 4,447,091 _RS21230 BWI76_RS21235: BWI76_RS21235 - hypothetical protein, at 4,447,077 to 4,447,256 _RS21235 BWI76_RS21240: BWI76_RS21240 - flavohemoprotein, at 4,447,201 to 4,448,391 _RS21240
Group Condition BWI76_RS21220 BWI76_RS21225 BWI76_RS21230 BWI76_RS21235 BWI76_RS21240
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 N.D. N.D. -5.3 +0.2
nitrogen source Gly-DL-Asp (N) -0.7 N.D. N.D. -4.7 +0.1
nitrogen source L-Phenylalanine (N) -0.0 N.D. N.D. -5.0 +0.2
phage KLEB17 MOI 1 -0.6 N.D. N.D. -4.6 +0.4
carbon source 2-Deoxyadenosine 4 mM (C) +0.0 N.D. N.D. -4.1 +0.1
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL -0.3 N.D. N.D. -3.4 -0.2
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.7 N.D. N.D. -3.5 +0.6
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL +0.1 N.D. N.D. -3.6 -0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 N.D. N.D. -3.6 +0.2
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.0 N.D. N.D. -3.4 -0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 N.D. N.D. -3.4 +0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.1 N.D. N.D. -3.5 -0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.1 N.D. N.D. -3.5 +0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 N.D. N.D. -3.5 +0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.1 N.D. N.D. -3.5 +0.2
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL +0.1 N.D. N.D. -3.5 +0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.1 N.D. N.D. -3.4 +0.3
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL +0.3 N.D. N.D. -3.5 +0.2
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL +0.4 N.D. N.D. -3.4 -0.1
carbon source RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x +0.4 N.D. N.D. -3.5 +0.3
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM +0.2 N.D. N.D. -2.7 -0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.4 N.D. N.D. -2.9 +0.2
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL +0.3 N.D. N.D. -2.8 +0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.6 N.D. N.D. -2.6 +0.1
stress Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM +0.2 N.D. N.D. -2.3 +0.4
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.7 N.D. N.D. -2.1 +0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.0 N.D. N.D. +3.2 -0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x +0.6 N.D. N.D. +2.0 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.5 N.D. N.D. +2.8 -0.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.8 N.D. N.D. +4.0 +0.4
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