Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS21060 and BWI76_RS21065 are separated by 158 nucleotidesBWI76_RS21065 and BWI76_RS21070 are separated by 114 nucleotidesBWI76_RS21070 and BWI76_RS21075 are separated by 10 nucleotidesBWI76_RS21075 and BWI76_RS21080 are separated by 34 nucleotides BWI76_RS21060: BWI76_RS21060 - transporter TonB, at 4,405,910 to 4,406,287 _RS21060 BWI76_RS21065: BWI76_RS21065 - ribosome biogenesis GTPase Der, at 4,406,446 to 4,407,924 _RS21065 BWI76_RS21070: BWI76_RS21070 - outer membrane protein assembly factor BamB, at 4,408,039 to 4,409,217 _RS21070 BWI76_RS21075: BWI76_RS21075 - membrane protein, at 4,409,228 to 4,409,848 _RS21075 BWI76_RS21080: BWI76_RS21080 - histidine--tRNA ligase, at 4,409,883 to 4,411,157 _RS21080
Group Condition BWI76_RS21060 BWI76_RS21065 BWI76_RS21070 BWI76_RS21075 BWI76_RS21080
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM +0.1 N.D. -6.0 -2.9 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.2 N.D. -3.8 -3.1 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM -0.3 N.D. -3.7 -3.1 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.4 N.D. -3.6 -3.0 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.1 N.D. -3.8 -3.2 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.4 N.D. -3.6 -3.0 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.3 N.D. -3.6 -3.0 N.D.
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL -0.2 N.D. -3.7 -3.0 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.4 N.D. -3.6 -2.9 N.D.
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml -0.6 N.D. -3.4 -2.8 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -0.4 N.D. -3.6 -2.9 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.2 N.D. -3.6 -3.0 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL -0.1 N.D. -3.7 -3.0 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.4 N.D. -3.5 -2.8 N.D.
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL -0.0 N.D. -3.7 -3.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x -0.3 N.D. -3.5 -2.9 N.D.
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.1 N.D. -3.6 -3.0 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL +0.0 N.D. -3.6 -3.0 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.2 N.D. -3.5 -2.9 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.1 N.D. -6.4 -0.1 N.D.
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.2 N.D. -3.4 -2.9 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml -0.1 N.D. -3.8 -2.6 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.2 N.D. -3.8 -2.5 N.D.
nitrogen source Uridine (N) -0.3 N.D. -6.0 +0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.0 N.D. -6.4 +0.6 N.D.
supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.1 N.D. -4.8 +1.6 N.D.
phage K. M5a1 KLEB26 MOI 0.1 +0.1 N.D. +4.7 -2.1 N.D.
phage KLEB17 MOI 0.1 -0.1 N.D. +4.1 +2.3 N.D.
phage KLEB20 MOI 1 -0.0 N.D. +5.0 +1.6 N.D.
phage KLEB31 MOI 1 +0.3 N.D. +4.3 +3.5 N.D.
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