Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS20990 and BWI76_RS20995 are separated by 177 nucleotidesBWI76_RS20995 and BWI76_RS21000 are separated by 3 nucleotidesBWI76_RS21000 and BWI76_RS21005 are separated by 37 nucleotidesBWI76_RS21005 and BWI76_RS21010 are separated by 370 nucleotides BWI76_RS20990: BWI76_RS20990 - hypothetical protein, at 4,388,400 to 4,390,073 _RS20990 BWI76_RS20995: BWI76_RS20995 - RNA degradosome polyphosphate kinase, at 4,390,251 to 4,392,311 _RS20995 BWI76_RS21000: BWI76_RS21000 - exopolyphosphatase, at 4,392,315 to 4,393,856 _RS21000 BWI76_RS21005: BWI76_RS21005 - sensor domain-containing phosphodiesterase, at 4,393,894 to 4,396,116 _RS21005 BWI76_RS21010: BWI76_RS21010 - Negative regulator of nickel and cobalt uptake (YfgG) (from data), at 4,396,487 to 4,396,678 _RS21010
Group Condition BWI76_RS20990 BWI76_RS20995 BWI76_RS21000 BWI76_RS21005 BWI76_RS21010
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB +0.1 -7.7 +0.6 -0.5 -1.5
carbon source L-Sorbose (C) -0.1 -6.6 -0.6 +0.0 +0.1
stress Nickel (II) chloride 1.5 mM -0.0 -1.9 -1.2 +0.3 -3.7
carbon source L-Sorbose (C) +0.0 -5.7 -0.3 -0.0 +0.4
stress RCH2_defined_1percent_glucose with Chloride 600 mM -0.0 -3.8 -0.3 -0.2 -0.9
stress Nickel (II) chloride 1.5 mM -0.3 -1.6 -0.5 +0.5 -3.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.1 -3.6 -1.0 -0.1 -0.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.0 -3.5 -1.1 +0.1 +0.3
stress Cobalt chloride 0.5 mM +0.2 +1.2 -0.4 +1.1 -3.4
stress Cobalt chloride 0.5 mM -0.1 +1.4 -0.9 +1.1 -2.8
stress Sisomicin 0.008 mg/ml -0.1 -2.7 +4.7 -0.2 -1.6
stress Sisomicin 0.008 mg/ml +0.2 -3.8 +4.1 -0.2 -0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.1 +2.8 -2.1 +0.1 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.4 +3.3 -2.6 +0.0 +0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.2 +2.9 -1.7 -0.1 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.3 +3.3 -2.1 -0.0 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +0.1 +3.3 -1.4 -0.0 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.0 +4.6 -1.1 -0.0 -0.7
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x -0.1 +4.2 -1.0 +0.0 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.0 +4.6 -0.9 -0.0 -0.1
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x +0.0 +4.2 -1.1 +0.1 +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 +6.0 -2.1 -0.1 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.1 +5.1 -1.2 -0.0 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.2 +5.1 -1.0 +0.0 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.2 +5.6 -1.2 -0.1 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.0 +5.4 -1.1 +0.1 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.2 +6.2 -1.0 -0.0 -0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.0 +7.1 -1.6 +0.0 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.1 +6.8 -1.4 +0.0 +0.5
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.3 +6.5 -0.8 -0.0 -0.1
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