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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS20695 and BWI76_RS20700 overlap by 1 nucleotides
BWI76_RS20700 and BWI76_RS20705 overlap by 1 nucleotides
BWI76_RS20705 and BWI76_RS20710 are separated by 219 nucleotides
BWI76_RS20710 and BWI76_RS20715 are separated by 96 nucleotides
BWI76_RS20695: BWI76_RS20695 - sulfate/thiosulfate transporter permease subunit, at 4,328,951 to 4,329,826
_RS20695
BWI76_RS20700: BWI76_RS20700 - sulfate/thiosulfate transporter subunit, at 4,329,826 to 4,330,659
_RS20700
BWI76_RS20705: BWI76_RS20705 - thiosulfate transporter subunit, at 4,330,659 to 4,331,675
_RS20705
BWI76_RS20710: BWI76_RS20710 - dyp-type peroxidase family protein, at 4,331,895 to 4,332,794
_RS20710
BWI76_RS20715: BWI76_RS20715 - RpoE-regulated lipoprotein, at 4,332,891 to 4,333,466
_RS20715
Group
Condition
BWI76
_RS20695
BWI76
_RS20700
BWI76
_RS20705
BWI76
_RS20710
BWI76
_RS20715
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
-1.0
-1.1
-1.3
-0.2
-3.3
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
-2.0
-2.0
-2.1
-0.0
-0.5
carbon source
D,L-Malic Acid (C)
-2.2
-1.5
-1.3
+0.1
-0.4
stress
perchlorate 100 mM
-1.9
-1.2
-1.5
-0.2
-0.5
nitrogen source
D-Alanine (N)
-1.5
-0.5
-1.1
-2.9
+1.2
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
-0.6
-1.6
-1.0
-0.1
-1.4
stress
Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
-1.2
-1.0
-0.8
-0.0
-1.5
carbon source
D,L-Malic Acid (C)
-1.7
-1.1
-1.3
+0.2
-0.4
nitrogen source
Cytosine (N)
-1.2
-1.6
-0.9
-0.7
+0.2
nitrogen source
Thymine (N)
-1.9
-1.3
-1.1
-0.3
+0.7
phage
KLEB1 MOI 10
-1.5
-0.6
-0.8
-0.7
-0.3
nitrogen source
N-Acetyl-D-glucosamine (N)
-1.4
-0.8
-1.3
-0.1
-0.1
nitrogen source
L-Valine (N)
-1.2
-1.1
-1.6
-0.2
+0.4
nitrogen source
L-Glutamic (N)
-1.5
-0.8
-0.9
-0.5
-0.0
nitrogen source
L-Glutamine (N)
-1.4
-1.4
-0.9
-0.2
+0.3
nitrogen source
L-Glutamine (N)
-1.4
-1.0
-0.8
-0.3
+0.1
stress
Sisomicin 0.008 mg/ml
+0.2
+0.4
+0.2
-1.8
-2.1
nitrogen source
nitrate (N)
-1.4
-1.1
-0.9
+0.4
-0.2
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days
-0.3
-1.1
-1.3
+0.3
-0.8
phage
K. M5a1 KLEB26 MOI 0.1
+1.2
-2.1
-0.1
-0.8
-1.3
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
-1.1
-1.0
-1.1
-0.2
+0.5
stress
perchlorate 100 mM
-1.2
-0.9
-0.8
+0.4
-0.5
nitrogen source
L-Proline (N)
-1.1
-1.1
-0.6
-0.7
+0.6
exudates
RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
+0.7
-0.5
-0.3
-1.3
+1.2
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
+0.8
+0.9
+1.2
+0.4
-0.3
micoeukaryotes
Tetrahymena sp., Mixed culture-1
+1.2
-0.1
+0.0
+0.7
+1.7
stress
Paraquat dichloride 0.1 mg/ml
+1.5
+2.3
+1.5
-0.1
-0.3
stress
Paraquat dichloride 0.1 mg/ml
+1.6
+2.0
+1.5
+0.4
-0.0
stress
Cobalt chloride 0.5 mM
+2.4
+2.0
+2.0
+0.2
-0.5
stress
Cobalt chloride 0.5 mM
+2.4
+2.3
+1.8
+0.3
-0.4
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