Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS19710	BWI76_RS19715	BWI76_RS19720	BWI76_RS19725	BWI76_RS19730
carbon source	D-Fructose (C)	-0.7	-0.1	+0.0	-1.3	-2.9
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.3	-0.7	-1.2	+0.0	-2.6
carbon source	2'-Deoxycytidine 10 mM (C)	-1.6	-0.9	-0.7	-0.1	-0.9
carbon source	D-Fructose (C)	-0.2	-0.2	+0.0	-1.4	-2.1
carbon source	succinate (C)	-0.5	-0.0	+0.1	-0.0	-3.2
carbon source	2'-Deoxycytidine 10 mM (C)	-0.6	-0.9	-0.6	-0.1	-1.1
carbon source	L-Sorbose (C)	-0.0	-0.0	+0.0	+0.1	-3.4
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.2	-0.0	-0.7	-0.3	-2.4
stress	Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM	-0.6	-0.0	-0.4	-0.2	-1.9
carbon source	L-Sorbose (C)	-0.4	+0.0	-0.1	+0.3	-2.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.8	-0.4	-0.3	+0.3	-1.5
carbon source	2'-Deoxycytidine 5 mM (C)	-0.8	-0.8	-0.3	+0.2	-0.9
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-1.1	+0.2	-0.5	-0.3	-0.7
carbon source	D-Alanine (C)	-0.3	+0.0	-0.1	+0.4	-2.3
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	+0.5	+0.0	-0.5	-0.0	-2.1
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.6	-0.4	-0.5	+0.0	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	+0.2	-0.2	-0.4	-1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9	+0.4	+0.4	+0.1	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.6	+0.2	-0.2	+0.5	-1.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.6	-0.3	-0.4	+0.2	-1.5
carbon source	RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 0.1 x	+0.4	-0.1	-0.3	+0.3	-1.7
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	+0.5	-0.1	-0.4	+0.3	-1.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+1.0	-0.1	-0.7	-0.0	-1.1
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+1.1	+0.3	-0.3	-0.2	-1.9
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+1.0	-0.1	-0.2	+0.2	-1.8
nitrogen source	L-tyrosine (N)	-1.2	-0.2	-0.3	+0.4	+0.9
stress	Sisomicin 0.008 mg/ml	+0.3	-0.0	-0.1	+1.3	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.7	+0.2	+0.8	-1.1
carbon source	Gly-Glu (C)	+1.4	+0.2	+0.4	+0.4	-1.0
carbon source	D-Raffinose (C)	+0.3	-0.0	-0.1	+1.3	+1.3