Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS19685	BWI76_RS19690	BWI76_RS19695	BWI76_RS19700	BWI76_RS19705
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-1.8	-0.4	-0.3	-0.0	-7.2
nitrogen source	L-tyrosine (N)	-2.8	-1.3	+0.0	-1.6	-1.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.9	+0.5	-1.0	-3.2	-2.1
carbon source	Gly-Glu (C)	-2.3	-0.9	-0.2	-1.6	-1.4
carbon source	D,L-Malic Acid (C)	-3.2	-0.8	+0.0	-0.2	-2.0
carbon source	D,L-Malic Acid (C)	-2.5	-0.1	+0.0	-0.7	-2.4
carbon source	succinate (C)	-1.4	-0.5	-0.3	-0.9	-2.4
carbon source	D-Alanine (C)	-1.1	-0.3	+0.2	-0.8	-3.0
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	-1.7	-0.5	+0.1	-2.6	-0.2
carbon source	succinate (C)	-1.3	-0.6	-0.3	-0.9	-1.7
stress	Sisomicin 0.008 mg/ml	-1.6	-1.3	-0.2	-1.7	-0.0
carbon source	L-Glutamine (C)	-1.4	+0.3	+0.2	-0.8	-3.0
carbon source	L-Sorbose (C)	-1.0	-2.9	+0.4	-0.4	-0.6
carbon source	D-Fructose (C)	-0.3	-3.5	+0.2	-1.0	+0.1
nitrogen source	Glycine (N)	-0.5	-2.2	-0.2	-0.6	-0.8
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-2.8	-0.4	+0.6	-0.9	-0.8
nitrogen source	nitrate (N)	-0.2	-4.3	-0.7	+1.2	+0.0
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.7	-0.5	+0.8	-2.5	-1.0
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-1.2	+0.8	-0.1	-0.8	-2.5
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-1.8	+0.0	+0.4	-1.6	-0.6
nitrogen source	L-Proline (N)	-2.0	-0.5	+0.7	-0.7	-0.7
nitrogen source	Uridine (N)	-0.5	+0.2	+0.5	+0.4	-3.1
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-1.6	-1.3	+0.7	+1.4	-1.5
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.6	-0.2	+0.9	+0.3	-2.3
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-1.3	-1.4	-0.3	+1.3	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.3	+0.1	+0.5	+2.4	-2.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.2	+3.1	+0.1	-1.1
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-1.1	-0.3	+0.7	+1.4	+1.6
nitrogen source	L-Lysine (N)	+1.1	-0.8	+0.3	+0.6	+2.0
nitrogen source	L-Lysine (N)	+1.1	-0.7	+0.6	+1.4	+2.1