Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS19420 and BWI76_RS19425 are separated by 151 nucleotidesBWI76_RS19425 and BWI76_RS19430 are separated by 141 nucleotidesBWI76_RS19430 and BWI76_RS19435 are separated by 14 nucleotidesBWI76_RS19435 and BWI76_RS19440 are separated by 77 nucleotides BWI76_RS19420: BWI76_RS19420 - Fe-S-binding ATPase, at 4,050,274 to 4,051,383 _RS19420 BWI76_RS19425: BWI76_RS19425 - methionine--tRNA ligase, at 4,051,535 to 4,053,568 _RS19425 BWI76_RS19430: BWI76_RS19430 - MolR family transcriptional regulator, at 4,053,710 to 4,057,426 _RS19430 BWI76_RS19435: BWI76_RS19435 - hypothetical protein, at 4,057,441 to 4,061,037 _RS19435 BWI76_RS19440: BWI76_RS19440 - putative transporter subunit, at 4,061,115 to 4,062,203 _RS19440
Group Condition BWI76_RS19420 BWI76_RS19425 BWI76_RS19430 BWI76_RS19435 BWI76_RS19440
phage KLEB29 MOI 1 -0.5 N.D. +0.2 -0.9 -0.7
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x -0.5 N.D. +0.1 -0.5 -0.8
stress Paraquat dichloride 0.1 mg/ml -0.7 N.D. -0.1 +0.1 -0.7
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -1.0 N.D. -0.3 -0.3 +0.2
stress Paraquat dichloride 0.1 mg/ml -1.4 N.D. +0.2 -0.1 -0.0
phage KLEB30 MOI 1 -0.5 N.D. +0.3 -0.1 -0.9
phage KLEB29 MOI 1 -0.5 N.D. +0.4 -0.4 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 N.D. +0.4 -0.4 -0.2
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL -1.2 N.D. -0.0 +0.3 +0.1
stress RCH2_defined_1percent_glucose with Chloride 600 mM -1.2 N.D. +0.2 +0.3 +0.1
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -1.3 N.D. -0.0 +0.2 +0.5
nitrogen source L-Lysine (N) +0.3 N.D. +0.2 +0.1 -1.0
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -1.2 N.D. +0.2 +0.1 +0.6
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM -0.9 N.D. -0.1 +0.3 +0.4
phage KLEB15 MOI 1 +0.1 N.D. +0.2 +0.6 -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 N.D. +0.3 +0.7 -0.4
phage KLEB13 MOI 0.1 -0.3 N.D. +0.4 +0.6 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 N.D. -0.2 +0.0 +1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 N.D. +0.8 -0.1 +0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.5 N.D. -0.0 +0.7 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 N.D. +0.2 +0.2 +0.9
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -0.5 N.D. +0.1 +0.6 +0.6
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL -0.5 N.D. +0.3 +0.6 +0.5
nitrogen source Glucuronamide (N) +0.2 N.D. -0.4 +0.6 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 N.D. +0.2 +0.6 +1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.2 N.D. +0.3 +0.5 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 N.D. +0.2 +0.6 +1.3
rhizosphere rhizosphere sample 1; outgrowth in LB +0.3 N.D. +0.3 +1.4 +0.1
stress Sisomicin 0.008 mg/ml +4.0 N.D. +0.2 -0.0 -0.4
stress Sisomicin 0.008 mg/ml +3.5 N.D. +0.1 +0.1 +0.1
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