Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS19350	BWI76_RS19355	BWI76_RS19360	BWI76_RS19365	BWI76_RS19370
stress	Nickel (II) chloride 1.5 mM	N.D.	-0.2	-0.3	-0.5	-2.0
phage	KLEB29 MOI 1	N.D.	+0.4	-0.7	-1.5	-0.6
nitrogen source	Glucuronamide (N)	N.D.	+0.3	-0.3	-1.2	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.5	-1.4	+0.3	-0.8
phage	K. M5a1 KLEB26 MOI 0.1	N.D.	+0.4	-1.0	+0.3	-1.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	N.D.	-0.3	-1.0	+0.4	-0.4
stress	Nickel (II) chloride 1.5 mM	N.D.	+0.1	+0.6	-0.1	-1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.3	+0.4	-1.4	-0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM	N.D.	-0.9	-0.2	+0.5	-0.4
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	N.D.	-0.3	+0.8	-0.6	-0.7
phage	KLEB24 MOI 1	N.D.	+0.7	-0.3	-0.7	-0.3
phage	KLEB26 MOI0.1	N.D.	+0.7	-0.3	-0.9	-0.1
stress	Chloramphenicol 0.001 mg/ml	N.D.	+0.7	-0.8	-0.3	+0.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	N.D.	-0.7	+1.1	-0.3	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	N.D.	-0.3	+1.3	-0.5	-0.4
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	N.D.	+0.1	+1.0	-0.1	-0.8
phage	KLEB30 MOI 1	N.D.	+1.0	-0.3	-0.6	+0.1
stress	Sisomicin 0.008 mg/ml	N.D.	-0.7	+1.2	+0.0	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+1.2	+0.9	-1.2	-0.3
phage	KLEB30 MOI 1	N.D.	+1.1	+0.2	-0.5	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	+1.1	+0.1	-0.6	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.7	-0.2	-0.3	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	+0.8	-0.2	-0.5	+0.9
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	N.D.	+0.3	+1.1	-0.5	+0.3
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	N.D.	+2.0	-0.2	-0.3	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	+0.3	+1.0	+0.5	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	-0.2	+1.4	+0.3	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	+0.8	+1.4	-0.1	-0.1
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	N.D.	+0.3	+1.4	+0.5	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	+1.1	+0.1	+1.2	-0.0