Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS19225	BWI76_RS19230	BWI76_RS19235	BWI76_RS19240	BWI76_RS19245
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	-0.1	-1.1	-0.8	-0.1
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.1	+0.1	-1.1	-1.2	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.0	+0.4	-0.8	-1.0	-0.5
phage	K. M5a1 KLEB10 MOI 10	-0.5	+0.1	+0.3	-2.3	+0.4
supernatant	Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.4	-0.5	+0.2	-1.4	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.0	-0.1	-0.5	-0.3	-0.9
nitrogen source	Casamino Acids (N)	-0.4	-0.6	+0.1	-0.8	+1.1
phage	K. M5a1 KLEB23 MOI 10	-0.4	+0.6	+0.9	-1.2	-0.4
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.5	+0.5	+0.6	-2.2	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.8	+0.2	-0.7	+0.8
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.5	+0.1	+0.4	+0.9	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	-0.9	+0.3	+0.5	+0.7
phage	KLEB30 MOI 1	-0.3	-0.4	+0.5	+1.3	-0.7
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL	-0.1	-0.1	-0.8	+1.2	+0.2
phage	K. M5a1 KLEB26 MOI 0.1	+0.4	-0.5	+0.5	+0.5	-0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.4	+0.6	-1.1	+0.5	+0.1
nitrogen source	Glycine (N)	-0.0	+0.3	-0.9	+0.7	+0.6
nitrogen source	nitrate (N)	+0.3	+1.1	+0.6	-0.2	-0.7
phage	KLEB1 MOI 0.1	-0.2	+0.6	-0.3	+1.3	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.4	+0.1	+0.2	+1.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.3	+0.4	-0.3	+1.3	-0.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.4	+0.6	+0.6	+1.3	-0.6
phage	KLEB1 MOI 10	-0.3	-0.6	+0.4	+1.2	+0.9
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.1	+0.7	+0.7	+1.0	-0.5
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.1	-0.0	+1.0	+1.3	-0.2
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.2	+0.6	+0.4	+0.8	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7	-0.1	+1.3	+0.7	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.3	+0.7	+0.6	+1.2	-0.6
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.3	+0.5	-0.2	+1.4	+0.9
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.1	+0.1	+1.1	+1.1	-0.2