Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS19115 and BWI76_RS19120 are separated by 27 nucleotidesBWI76_RS19120 and BWI76_RS19125 are separated by 90 nucleotidesBWI76_RS19125 and BWI76_RS19130 are separated by 114 nucleotidesBWI76_RS19130 and BWI76_RS19135 are separated by 136 nucleotides BWI76_RS19115: BWI76_RS19115 - outer membrane assembly protein AsmA, at 3,973,669 to 3,975,516 _RS19115 BWI76_RS19120: BWI76_RS19120 - dCTP deaminase, at 3,975,544 to 3,976,125 _RS19120 BWI76_RS19125: BWI76_RS19125 - uridine kinase, at 3,976,216 to 3,976,857 _RS19125 BWI76_RS19130: BWI76_RS19130 - 3-methyladenine DNA glycosylase 2, at 3,976,972 to 3,977,820 _RS19130 BWI76_RS19135: BWI76_RS19135 - molecular chaperone, at 3,977,957 to 3,979,309 _RS19135
Group Condition BWI76_RS19115 BWI76_RS19120 BWI76_RS19125 BWI76_RS19130 BWI76_RS19135
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 N.D. N.D. -1.4 +0.1
nitrogen source Uridine (N) +0.0 N.D. N.D. -1.3 -0.1
supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.4 N.D. N.D. +0.1 -0.1
supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.3 N.D. N.D. +0.1 -0.0
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x -0.0 N.D. N.D. -1.4 +0.2
stress Cobalt chloride 0.5 mM -1.6 N.D. N.D. +0.4 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.1 N.D. N.D. +0.1 +0.3
stress Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL -0.5 N.D. N.D. -0.5 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. N.D. +0.5 -0.7
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml +0.5 N.D. N.D. -0.7 -0.3
nitrogen source L-Arginine (N) +0.3 N.D. N.D. -1.0 +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM -0.8 N.D. N.D. +0.3 +0.3
phage KLEB17 MOI 1 -1.0 N.D. N.D. +0.3 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 N.D. N.D. +0.9 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 N.D. N.D. +0.9 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 N.D. N.D. -0.6 +0.7
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL +0.7 N.D. N.D. -0.4 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 N.D. N.D. -0.4 +1.1
phage K. M5a1 KLEB22 MOI 10 +0.5 N.D. N.D. +0.6 +0.3
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.2 N.D. N.D. +0.6 +0.8
phage KLEB29 MOI 1 +0.5 N.D. N.D. +0.7 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 N.D. N.D. +0.6 +0.4
phage K. M5a1 KLEB23 MOI 10 +0.3 N.D. N.D. +1.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 N.D. N.D. +1.7 -0.2
phage K. M5a1 KLEB23 MOI 1 +0.9 N.D. N.D. +0.8 -0.1
phage K. M5a1 KLEB22 MOI 1 +0.5 N.D. N.D. +1.2 -0.0
phage KLEB16 MOI 1 +1.0 N.D. N.D. +0.4 +0.4
phage K. M5a1 KLEB22 MOI 10 +0.6 N.D. N.D. +1.2 -0.0
phage K. M5a1 KLEB23 MOI 1 +0.4 N.D. N.D. +1.1 +0.3
phage K. M5a1 KLEB23 MOI 10 +0.9 N.D. N.D. +1.2 +0.2
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