Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS18915 and BWI76_RS18920 are separated by 371 nucleotidesBWI76_RS18920 and BWI76_RS18925 are separated by 39 nucleotidesBWI76_RS18925 and BWI76_RS18930 overlap by 4 nucleotidesBWI76_RS18930 and BWI76_RS18935 overlap by 4 nucleotides BWI76_RS18915: BWI76_RS18915 - NAD(P)-dependent oxidoreductase, at 3,923,403 to 3,924,227 _RS18915 BWI76_RS18920: BWI76_RS18920 - ATP phosphoribosyltransferase, at 3,924,599 to 3,925,498 _RS18920 BWI76_RS18925: BWI76_RS18925 - histidinol dehydrogenase, at 3,925,538 to 3,926,842 _RS18925 BWI76_RS18930: BWI76_RS18930 - histidinol-phosphate transaminase, at 3,926,839 to 3,927,900 _RS18930 BWI76_RS18935: BWI76_RS18935 - bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase, at 3,927,897 to 3,928,964 _RS18935
Group Condition BWI76_RS18915 BWI76_RS18920 BWI76_RS18925 BWI76_RS18930 BWI76_RS18935
nitrogen source Uridine (N) +0.4 -7.3 -7.8 -9.4 -8.9
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 -7.9 -6.8 -10.5 -7.6
nitrogen source Glycine (N) +0.3 -7.2 -7.7 -9.3 -8.8
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.3 -7.6 -6.0 -10.2 -8.3
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x +0.1 -7.7 -6.3 -10.3 -7.5
nitrogen source nitrate (N) -1.4 -6.9 -6.7 -9.0 -7.6
nitrogen source L-Cysteine (N) +0.1 -7.3 -7.9 -7.6 -8.9
nitrogen source L-Proline (N) +0.0 -7.4 -6.0 -9.5 -8.1
nitrogen source L-Asparagine (N) +0.4 -7.2 -7.8 -7.4 -8.8
nitrogen source Uridine (N) +1.2 -7.2 -7.8 -9.3 -7.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.2 -6.1 -7.0 -10.3 -6.9
nitrogen source D-Serine (N) +0.2 -6.9 -7.5 -9.0 -7.2
nitrogen source Urea (N) -0.1 -7.5 -7.3 -6.3 -9.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM +0.4 -7.8 -8.6 -7.2 -6.9
carbon source D-Sorbitol (C) -0.3 -6.9 -7.7 -9.2 -6.0
carbon source RCH2_defined_glucose with MS_media 0.5x -0.0 -7.8 -5.3 -10.3 -6.6
nitrogen source L-Serine (N) +0.6 -7.2 -7.8 -9.3 -6.2
nitrogen source D-Serine (N) +0.3 -7.4 -7.9 -7.6 -7.3
nitrogen source Ammonium chloride (N) +0.0 -6.0 -6.9 -9.5 -7.5
supernatant control Vogels_fungal_media; pH 5.5 -0.9 -6.9 -4.5 -9.4 -8.1
nitrogen source L-Arginine (N) +0.1 -7.0 -6.8 -9.1 -6.9
nitrogen source Gly-DL-Asp (N) -0.0 -6.5 -6.3 -8.6 -8.1
nitrogen source Cytidine (N) +0.6 -7.4 -7.9 -7.6 -7.3
carbon source D-Trehalose (C) +0.3 -6.8 -6.2 -9.1 -7.6
nitrogen source Putrescine (N) +0.7 -7.4 -7.2 -7.4 -8.1
nitrogen source Ammonium chloride (N) +0.1 -5.7 -6.7 -9.4 -7.6
carbon source Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM +0.1 -7.8 -8.6 -7.2 -5.6
nitrogen source L-Glutamine (N) -0.1 -7.3 -7.1 -5.6 -8.9
carbon source D-Gluconic Acid (C) +0.1 -4.4 -7.4 -9.0 -8.3
carbon source D-Glucose-6-Phosphate (C) +0.5 -6.7 -6.8 -9.1 -6.4
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