Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS18315 and BWI76_RS18320 are separated by 38 nucleotidesBWI76_RS18320 and BWI76_RS18325 are separated by 151 nucleotidesBWI76_RS18325 and BWI76_RS18330 are separated by 57 nucleotidesBWI76_RS18330 and BWI76_RS18335 overlap by 4 nucleotides BWI76_RS18315: BWI76_RS18315 - tRNA-Cys, at 3,804,631 to 3,804,704 _RS18315 BWI76_RS18320: BWI76_RS18320 - tRNA-Gly, at 3,804,743 to 3,804,818 _RS18320 BWI76_RS18325: BWI76_RS18325 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 3,804,970 to 3,805,518 _RS18325 BWI76_RS18330: BWI76_RS18330 - excinuclease ABC subunit C, at 3,805,576 to 3,807,408 _RS18330 BWI76_RS18335: BWI76_RS18335 - DNA-binding response regulator, at 3,807,405 to 3,808,061 _RS18335
Group Condition BWI76_RS18315 BWI76_RS18320 BWI76_RS18325 BWI76_RS18330 BWI76_RS18335
stress Cephalothin 0.16 mg/ml N.D. N.D. N.D. -0.3 -3.0
stress Cephalothin 0.16 mg/ml N.D. N.D. N.D. -0.3 -2.6
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM N.D. N.D. N.D. -2.3 -0.6
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM N.D. N.D. N.D. -2.7 -0.1
stress RCH2_defined_1percent_glucose with Chloride 600 mM N.D. N.D. N.D. +0.1 -2.2
stress RCH2_defined_1percent_glucose with Chloride 600 mM N.D. N.D. N.D. -0.1 -1.9
carbon source succinate (C) N.D. N.D. N.D. -0.1 -1.8
stress Chloride 1000 mM N.D. N.D. N.D. +0.0 -1.6
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. +0.3 -1.9
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. +0.1 -1.5
nitrogen source Thymidine (N) N.D. N.D. N.D. -0.0 +1.5
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x N.D. N.D. N.D. +0.3 +1.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. N.D. +0.2 +1.4
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. N.D. +0.7 +0.9
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. N.D. +0.4 +1.3
phage KLEB17 MOI 1 N.D. N.D. N.D. +0.2 +1.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. N.D. N.D. +0.5 +1.2
carbon source D-Lactate (C) N.D. N.D. N.D. +0.1 +1.5
phage KLEB17 MOI 1 N.D. N.D. N.D. +0.3 +1.4
stress Nickel (II) chloride 1.5 mM N.D. N.D. N.D. +0.6 +1.1
stress nitrite 40 mM N.D. N.D. N.D. +0.0 +1.7
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. N.D. +0.0 +1.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. N.D. N.D. +0.4 +1.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. N.D. N.D. +0.2 +1.6
stress nitrite 40 mM N.D. N.D. N.D. +0.2 +1.7
nitrogen source L-Phenylalanine (N) N.D. N.D. N.D. +0.7 +1.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x N.D. N.D. N.D. +0.2 +1.8
nitrogen source Thymidine (N) N.D. N.D. N.D. +0.5 +1.5
phage KLEB20 MOI 1 N.D. N.D. N.D. +0.6 +1.7
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. N.D. N.D. +0.2 +2.1
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