Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS18015	BWI76_RS18020	BWI76_RS18025	BWI76_RS18030	BWI76_RS18035
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.0	-0.5	-1.0	-0.4	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.3	-0.8	+0.2	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	-0.2	-1.1	+0.4	-0.6
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.0	-0.4	-1.0	-0.2	+0.3
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	-0.1	-0.3	-1.0	-0.3	+0.3
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-0.4	-0.0	-1.3	+0.1	+0.4
phage	K. M5a1 KLEB23 MOI 10	+0.2	-1.0	+0.4	-0.4	-0.3
phage	KLEB30 MOI 1	-0.3	-0.5	-0.6	+0.1	+0.3
phage	KLEB17 MOI 1	-0.0	-0.6	+0.7	-0.1	-0.8
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	-0.4	-0.1	-0.8	+0.2	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.5	-1.0	+0.5	+0.2	+0.3
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.2	+0.3	-0.9	-0.4	+0.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.8	+0.2	-0.7	-0.4	-0.2
phage	KLEB1 MOI 10	+0.1	-0.8	+0.7	-0.6	+0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.1	+0.7	-0.8	-0.1	+0.3
nitrogen source	Glucuronamide (N)	+0.3	+0.1	-1.1	+0.4	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	+0.1	-1.0	+0.5	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	-0.4	+0.5	+0.4	-0.6
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.4	+0.5	-1.2	+0.1	+0.5
mixed community	LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.2	+0.2	-0.9	+0.3	+0.4
phage	KLEB17 MOI 0.1	-0.3	-0.6	+1.1	+0.5	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.1	+0.1	-0.3	+1.2	-0.3
micoeukaryotes	Tetrahymena sp., Mixed culture-1	+0.4	+0.3	-0.8	+0.2	+0.6
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.5	+0.4	+0.5	-0.2	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0	+0.5	-0.1	-0.1	-0.4
phage	KLEB15 MOI 10	+0.4	+0.4	-0.3	+0.6	-0.2
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.7	+0.4	-0.2	-0.4	+0.4
phage	K. M5a1 KLEB23 MOI 1	+0.2	-0.4	+0.2	-0.1	+1.1
phage	K. M5a1 KLEB23 MOI 10	+0.1	-0.4	+0.2	+0.3	+1.0
micoeukaryotes	Dictyostellum sp.mixed culture-1	-0.1	-0.1	+0.2	+0.9	+0.6