Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS17965	BWI76_RS17970	BWI76_RS17975	BWI76_RS17980	BWI76_RS17985
carbon source	Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM	-0.2	-0.1	-6.0	-5.3	+0.2
nitrogen source	L-tyrosine (N)	+0.3	-4.5	-2.7	-3.0	-0.3
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.0	-0.3	-5.5	-3.7	+0.2
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.5	+0.5	-5.3	-5.1	+0.1
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.3	+0.6	-4.8	-5.0	+0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.3	-1.0	-5.4	-4.2	+1.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.2	-0.2	-4.9	-3.9	-0.3
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	-0.1	-0.2	-3.8	-4.8	-0.1
stress	Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM	+0.4	+0.4	-4.3	-5.0	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.6	-0.2	-5.3	-4.1	+0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.1	+0.5	-5.2	-3.9	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.1	+0.1	-5.0	-3.6	-0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.4	+0.3	-4.9	-3.8	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.3	+0.5	-5.0	-4.6	+0.4
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.3	-0.1	-4.5	-4.4	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.0	+0.3	-5.4	-2.6	-0.6
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.3	+0.5	-5.4	-3.8	+0.2
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	+0.1	+0.6	-5.7	-4.2	+0.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.2	+0.2	-5.4	-3.4	+0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.3	+0.2	-4.2	-4.3	+0.1
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	+0.3	+0.3	-3.8	-4.6	-0.2
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.1	+0.3	-3.8	-5.6	+1.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.3	+0.3	-4.1	-3.9	-0.4
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.1	+1.4	-4.8	-3.0	-0.5
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	+0.5	+0.3	-3.3	-4.4	+0.3
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.0	+0.8	-5.3	-2.6	+0.5
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	+0.2	+0.4	-4.6	-2.9	+0.6
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	+0.4	+0.1	-5.5	-2.0	+0.9
stress	Sisomicin 0.008 mg/ml	-0.2	-0.6	+3.4	+4.3	-0.4
stress	Sisomicin 0.008 mg/ml	+0.4	+0.8	+4.3	+5.1	-0.4