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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS17360 and BWI76_RS17365 overlap by 1 nucleotides
BWI76_RS17365 and BWI76_RS17370 are separated by 9 nucleotides
BWI76_RS17370 and BWI76_RS17375 are separated by 10 nucleotides
BWI76_RS17375 and BWI76_RS17380 are separated by 1 nucleotides
BWI76_RS17360: BWI76_RS17360 - nitrate reductase, at 3,598,066 to 3,600,666
_RS17360
BWI76_RS17365: BWI76_RS17365 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4)
(from data)
, at 3,600,666 to 3,604,736
_RS17365
BWI76_RS17370: BWI76_RS17370 - nitrate transporter NasD, at 3,604,746 to 3,605,534
_RS17370
BWI76_RS17375: BWI76_RS17375 - nitrate ABC transporter, permease protein, at 3,605,545 to 3,606,429
_RS17375
BWI76_RS17380: BWI76_RS17380 - nitrate transporter component, at 3,606,431 to 3,607,687
_RS17380
Group
Condition
BWI76
_RS17360
BWI76
_RS17365
BWI76
_RS17370
BWI76
_RS17375
BWI76
_RS17380
nitrogen source
nitrate (N)
+0.2
-4.3
-3.5
-3.0
-4.4
nitrogen source
nitrate (N)
-0.0
-3.4
-2.7
-3.5
-5.0
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.0
-2.3
-2.7
-1.3
-1.6
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.5
-2.0
-0.7
-2.2
-1.9
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.4
-1.6
-1.5
-1.9
-1.1
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.2
-1.3
-1.2
-1.6
-1.9
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.2
-1.7
-1.1
-0.6
-1.4
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.1
-1.2
-1.5
-1.0
-1.1
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.3
-1.5
-1.2
-0.7
-1.0
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-1.1
-1.0
-0.5
-0.5
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
-0.2
-2.3
-0.7
-0.1
nitrogen source
L-tyrosine (N)
+0.1
-0.3
-1.6
+0.2
-1.3
phage
KLEB31 MOI 1
+0.3
+0.1
-0.8
-1.3
-0.8
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
+0.1
+0.1
-2.8
+0.4
-0.2
nitrogen source
Gly-DL-Asp (N)
-0.2
-0.3
+1.3
-1.5
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.2
+2.2
-1.0
+0.0
nitrogen source
L-Phenylalanine (N)
+0.3
-0.3
+0.9
+1.0
+0.7
nitrogen source
L-Isoleucine (N)
+0.4
-0.5
+0.8
+1.0
+0.9
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x
-0.2
+0.1
+3.0
-0.9
+0.7
nitrogen source
L-Isoleucine (N)
+0.2
-0.5
+1.1
+1.2
+0.8
carbon source
Gly-Glu (C)
+0.4
-0.1
-0.9
+0.5
+2.9
nitrogen source
L-Glutamic (N)
+0.2
-0.0
+1.2
+1.2
+0.6
micoeukaryotes
Dictyostellum sp.mixed culture-1
-0.1
+0.3
+1.9
+1.2
-0.2
phage
KLEB1 MOI 0.1
+0.4
+0.4
+1.2
+0.8
+0.4
nitrogen source
L-aspartic (N)
+0.4
-0.0
+1.5
+1.0
+0.6
nitrogen source
L-Threonine (N)
+0.3
-0.7
+1.1
+1.7
+1.2
nitrogen source
L-Threonine (N)
+0.2
-0.8
+1.7
+1.5
+1.1
nitrogen source
Thymidine (N)
+0.2
-0.5
+1.7
+1.3
+1.0
nitrogen source
Thymidine (N)
+0.3
-0.5
+1.6
+1.5
+1.3
nitrogen source
Thymine (N)
+0.6
-1.4
+2.7
+1.4
+1.7
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