Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS17245	BWI76_RS17250	BWI76_RS17255	BWI76_RS17260	BWI76_RS17265
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	-0.1	-3.8	-0.3	+0.1	N.D.
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	-0.1	-3.1	-0.1	+0.1	N.D.
nitrogen source	RCH2_defined_Glucose_noNitrogen in Eppendorf tube with sand	-0.2	-2.3	-0.6	-0.1	N.D.
mixed community	RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads, cultured with Sinorhizobium meliloti and Methylobacterium sp. UNC378MF	-0.2	-2.2	-0.1	-0.2	N.D.
mixed community	RCH2_defined_Glucose_noNitrogen in Eppendorf tube with sand, cultured with Sinorhizobium meliloti and Methylobacterium sp. UNC378MF	+0.1	-2.2	-0.2	-0.2	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.2	-0.6	-0.8	-0.6	N.D.
nitrogen source	RCH2_defined_Glucose_noNitrogen in Eppendorf tube	-0.2	-1.8	-0.3	-0.0	N.D.
nitrogen source	RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads	-0.1	-1.5	-0.4	-0.1	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.1	-0.9	-0.8	-0.5	N.D.
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.3	+0.3	-0.9	-1.1	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM	-0.1	-1.0	-0.8	-0.1	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	+0.0	-0.7	-0.7	-0.4	N.D.
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	-0.1	-0.8	-0.6	-0.2	N.D.
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.1	-0.8	-0.7	-0.4	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	+0.0	-0.9	-0.7	-0.2	N.D.
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days	-0.0	-1.5	-0.3	+0.1	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM	+0.2	-1.0	-0.7	+0.1	N.D.
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.3	+0.4	-0.9	-0.5	N.D.
phage	KLEB17 MOI 0.1	-0.6	+0.6	-0.0	-0.8	N.D.
phage	K. M5a1 KLEB22 MOI 10	+0.3	+0.5	-0.6	-0.8	N.D.
nitrogen source	Thymine (N)	-0.0	+0.7	-0.8	-0.5	N.D.
nitrogen source	L-Lysine (N)	-0.1	+0.5	+0.2	-1.1	N.D.
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.2	+0.6	-0.2	-0.9	N.D.
stress	RCH2_defined_1percent_glucose with Chloride 600 mM	+0.3	-1.0	+0.4	+0.7	N.D.
phage	K. M5a1 KLEB23 MOI 1	+0.6	+0.6	-0.6	+0.2	N.D.
phage	KLEB29 MOI 1	-0.1	+0.7	+0.7	+0.4	N.D.
stress	Cephalothin 0.16 mg/ml	-0.0	+0.5	+0.9	+0.4	N.D.
carbon source	Gly-Glu (C)	+0.1	+0.1	+0.7	+1.1	N.D.
phage	KLEB31 MOI 1	+0.3	+0.7	+0.6	+0.4	N.D.
stress	Cobalt chloride 0.5 mM	+0.8	+1.0	+0.3	+0.8	N.D.