Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS17240	BWI76_RS17245	BWI76_RS17250	BWI76_RS17255	BWI76_RS17260
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	-0.4	-0.1	-3.8	-0.3	+0.1
nitrogen source	RCH2_defined_Glucose_noNitrogen in Eppendorf tube with sand	-0.4	-0.2	-2.3	-0.6	-0.1
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	+0.0	-0.1	-3.1	-0.1	+0.1
nitrogen source	RCH2_defined_Glucose_noNitrogen in Eppendorf tube	-0.4	-0.2	-1.8	-0.3	-0.0
mixed community	RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads, cultured with Sinorhizobium meliloti and Methylobacterium sp. UNC378MF	+0.0	-0.2	-2.2	-0.1	-0.2
mixed community	RCH2_defined_Glucose_noNitrogen in Eppendorf tube with sand, cultured with Sinorhizobium meliloti and Methylobacterium sp. UNC378MF	-0.1	+0.1	-2.2	-0.2	-0.2
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	-0.7	-0.1	-0.8	-0.6	-0.3
nitrogen source	RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads	-0.4	-0.1	-1.5	-0.4	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	-0.7	-0.1	-0.4	-0.6	-0.5
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	-0.6	+0.0	-0.9	-0.7	-0.2
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM	-0.4	-0.1	-1.0	-0.8	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.5	+0.1	-0.8	-0.7	-0.4
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-1.4	-0.1	-0.4	-0.4	+0.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	-0.4	-0.1	-0.8	-0.6	-0.2
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	-0.3	+0.0	-0.7	-0.7	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM	-0.6	+0.2	-1.0	-0.7	+0.1
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days	-0.4	-0.0	-1.5	-0.3	+0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.0	+0.1	-0.9	-0.8	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.0	-0.3	+0.3	-0.9	-1.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.3	-0.2	-0.6	-0.8	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.3	-0.1	+0.3	-0.6	+0.0
phage	KLEB17 MOI 0.1	-0.8	-0.6	+0.6	-0.0	-0.8
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.3	-0.3	+0.4	-0.9	-0.5
phage	K. M5a1 KLEB22 MOI 10	+0.0	+0.3	+0.5	-0.6	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.8	-0.3	+0.7	-0.2	+0.4
stress	RCH2_defined_1percent_glucose with Chloride 600 mM	-0.0	+0.3	-1.0	+0.4	+0.7
carbon source	Gly-Glu (C)	-0.7	+0.1	+0.1	+0.7	+1.1
stress	Paraquat dichloride 0.1 mg/ml	+0.5	-0.4	+1.0	-0.2	+0.3
phage	KLEB31 MOI 1	+0.3	+0.3	+0.7	+0.6	+0.4
stress	Cobalt chloride 0.5 mM	-0.1	+0.8	+1.0	+0.3	+0.8