Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS17210	BWI76_RS17215	BWI76_RS17220	BWI76_RS17225	BWI76_RS17230
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.6	-0.4	-1.8	-1.2	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	+0.2	-1.9	-1.0	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.5	-0.4	-0.8	-0.7	-1.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	-0.4	-0.4	-0.5	-0.8
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.5	-0.2	-1.0	-0.3	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8	-0.3	-1.0	-0.8	+0.3
phage	KLEB1 MOI 10	-0.8	-0.4	-0.4	-0.0	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	-0.2	-0.5	-0.2	-1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	-0.1	-1.0	-0.2	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.4	-0.0	-0.8	-0.4	-0.9
phage	KLEB1 MOI 0.1	+0.3	-0.6	-0.1	-0.6	-0.7
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-1.1	-0.1	-0.2	+0.3	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2	+0.0	-0.5	-0.8	-0.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.5	-0.2	-0.7	-0.6	+0.4
phage	KLEB1 MOI 10	-0.5	-0.3	-0.5	+0.2	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	+0.1	-0.8	-0.2	-0.6
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.1	-0.1	-0.4	+0.9	-0.7
phage	KLEB31 MOI 1	+0.2	+0.2	-0.6	+0.6	-0.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-1.0	-0.0	+0.2	+0.5	+0.3
phage	K. M5a1 KLEB23 MOI 10	-0.0	+0.4	-1.0	+0.4	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.2	-0.2	-0.9	+0.2	-0.1
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	+0.5	-0.2	-0.2	+0.8	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.3	-0.0	+1.2	-0.6
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-0.4	-0.1	+0.2	+0.2	+1.2
stress	Paraquat dichloride 0.1 mg/ml	-0.5	-0.0	+0.4	+0.5	+0.8
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.2	+0.4	-0.3	+0.3	+0.8
stress	Sisomicin 0.008 mg/ml	-0.3	+0.0	+0.8	+0.7	+0.4
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.5	-0.2	+0.5	+0.1	+0.9
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.3	-0.0	+0.7	+0.8	+0.6
phage	K. M5a1 KLEB26 MOI 0.1	+1.4	+0.6	-0.0	+0.8	+0.7