Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS17090	BWI76_RS17095	BWI76_RS17100	BWI76_RS17105	BWI76_RS17110
phage	KLEB17 MOI 1	N.D.	-0.4	+0.1	-0.0	-5.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	N.D.	-1.1	+0.1	+0.1	-2.8
nitrogen source	Glycine (N)	N.D.	-1.6	-0.1	-0.0	-1.7
phage	KLEB1 MOI 0.1	N.D.	-0.3	-0.5	-0.6	-1.8
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	N.D.	-0.7	-2.4	+0.4	-0.3
phage	KLEB1 MOI 10	N.D.	-0.6	+0.2	-1.0	-1.6
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	N.D.	-0.6	-0.4	-0.2	-1.1
nitrogen source	L-Asparagine (N)	N.D.	-0.7	-0.3	+0.0	-1.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	N.D.	-0.8	-0.3	+0.1	-1.1
nitrogen source	Adenosine (N)	N.D.	-0.9	-0.3	+0.2	-1.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-0.8	+0.3	-0.3	-1.3
phage	KLEB31 MOI 1	N.D.	-0.1	-0.1	+0.3	-2.1
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	N.D.	-0.6	+0.4	-0.1	-1.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	-1.2	+0.3	-0.1	-0.7
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	N.D.	-0.4	+0.4	-0.2	-1.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	-0.8	+0.7	-0.3	-1.2
nitrogen source	Casamino Acids (N)	N.D.	+0.1	-0.5	+0.3	-1.4
nitrogen source	Uridine (N)	N.D.	+0.9	-1.6	-0.1	-0.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	-1.0	+0.5	-0.2	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.9	-0.2	-0.3	-1.7
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	N.D.	+0.3	+1.2	-1.0	-1.0
stress	Cobalt chloride 0.5 mM	N.D.	-0.4	+0.8	+0.2	-1.0
stress	Cephalothin 0.16 mg/ml	N.D.	+0.4	+0.7	+0.1	-1.4
phage	K. M5a1 KLEB26 MOI 0.1	N.D.	+0.6	-1.4	+1.0	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	N.D.	+0.1	-0.9	+0.1	+1.4
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	N.D.	+0.4	+1.2	-0.2	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.1	+2.3	+0.0	-1.3
nitrogen source	Uridine (N)	N.D.	+0.9	+0.0	-0.5	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.9	+0.7	+0.2	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.4	+0.7	+0.1	+2.7