Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS16590	BWI76_RS16595	BWI76_RS16600	BWI76_RS16605	BWI76_RS16610
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-1.2	-0.8	-1.4	-2.0	+0.9
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.4	-1.1	-0.4	-0.8	+0.0
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-1.7	-0.3	-0.7	-0.3	+0.4
phage	K. M5a1 KLEB23 MOI 10	-0.2	+0.5	-0.3	-1.0	-1.1
nitrogen source	L-Arginine (N)	-1.5	+0.7	-0.3	-0.3	-0.8
phage	KLEB17 MOI 1	-1.4	-0.8	-0.2	-0.2	+0.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.4	+0.3	-0.3	-2.2	+1.1
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-1.1	-0.1	+0.0	-0.7	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.6	+0.4	-0.6	-0.3	-0.4
nitrogen source	Thymine (N)	-0.9	+0.1	-0.5	-0.4	+0.3
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.3	+0.5	-0.2	-0.4	-0.8
nitrogen source	Glycine (N)	-1.2	+0.5	-0.2	-0.5	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.5	-0.4	-0.5	-0.8	+0.1
phage	KLEB30 MOI 1	-1.1	+0.6	+0.0	-0.2	-0.3
phage	KLEB17 MOI 0.1	+0.5	-1.0	-0.2	-0.4	+0.4
nitrogen source	Gly-DL-Asp (N)	-0.8	+0.3	-0.7	+0.5	+0.3
phage	K. M5a1 KLEB23 MOI 1	+0.9	-0.1	-0.2	+0.1	-1.1
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.9	+0.1	-0.5	-0.6	-0.1
nitrogen source	nitrate (N)	-1.3	+0.0	+0.1	+0.5	+0.6
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.8	+0.2	+0.4	-0.6	-0.6
ecofab	LB in EcoFAB_10mL	-0.5	-0.7	+0.5	+0.3	+0.5
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+1.0	+0.7	-0.0	-1.5	+0.2
phage	KLEB17 MOI 1	+0.2	-0.6	+0.1	-0.4	+1.1
stress	Cobalt chloride 0.5 mM	-0.9	-0.3	-0.3	+0.1	+2.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	-0.3	+0.4	-0.4	+1.4
stress	Chloramphenicol 0.001 mg/ml	+0.2	+1.0	-0.1	-0.4	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.7	-0.2	+0.5	+0.4	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.7	+0.3	+0.3	-0.2	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0	+0.6	+0.1	+0.3	+0.5
stress	Paraquat dichloride 0.1 mg/ml	+0.6	+1.8	+0.3	+0.0	-0.0