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Fitness for 5 genes in
Klebsiella michiganensis M5al
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500 nt
BWI76_RS16505 and BWI76_RS16510 are separated by 551 nucleotides
BWI76_RS16510 and BWI76_RS16515 are separated by 18 nucleotides
BWI76_RS16515 and BWI76_RS16520 are separated by 111 nucleotides
BWI76_RS16520 and BWI76_RS16525 are separated by 298 nucleotides
BWI76_RS16505: BWI76_RS16505 - MFS transporter, at 3,420,784 to 3,421,950
_RS16505
BWI76_RS16510: BWI76_RS16510 - transcriptional repressor PurR, at 3,422,502 to 3,423,527
_RS16510
BWI76_RS16515: BWI76_RS16515 - LysR family transcriptional regulator, at 3,423,546 to 3,424,457
_RS16515
BWI76_RS16520: BWI76_RS16520 - Bcr/CflA family multidrug efflux MFS transporter, at 3,424,569 to 3,425,753
_RS16520
BWI76_RS16525: BWI76_RS16525 - cyclopropane-fatty-acyl-phospholipid synthase, at 3,426,052 to 3,427,203
_RS16525
Group
Condition
BWI76
_RS16505
BWI76
_RS16510
BWI76
_RS16515
BWI76
_RS16520
BWI76
_RS16525
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
+0.2
+0.3
-3.7
-2.7
-1.6
carbon source
Inosine (C)
-0.3
-0.3
-3.6
-2.6
+0.2
carbon source
Inosine (C)
-0.1
+0.1
-2.1
-4.2
+0.4
carbon source
2-Deoxyadenosine 4 mM (C)
+0.1
-0.1
-1.7
-3.2
-0.7
carbon source
2'-Deoxyinosine 10 mM (C)
-0.1
+0.0
-2.3
-2.9
-0.3
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.4
-0.1
-1.0
-2.5
-0.5
phage
KLEB1 MOI 10
-0.5
+0.4
-3.3
-0.2
+0.0
phage
K. M5a1 KLEB26 MOI 0.1
-0.5
+0.6
-4.1
+0.3
+0.3
carbon source
2-Deoxyadenosine 4 mM (C)
-0.1
+0.1
-1.4
-2.4
+0.4
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB
-0.2
+0.1
-0.8
-0.6
-1.5
carbon source
2'-Deoxyinosine 5 mM (C)
-0.4
+0.2
-1.3
-1.7
+0.2
carbon source
2'-Deoxyinosine 10 mM (C)
-0.1
+0.6
-1.2
-2.0
+0.0
phage
KLEB20 MOI 1
+0.9
-0.7
-2.4
+0.2
-0.4
mixed community
RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.0
+0.5
-2.3
+0.4
-0.7
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB
-0.2
+0.7
+0.0
-0.3
-2.3
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.3
+1.2
-4.0
-0.1
+0.7
stress
Chloramphenicol 0.001 mg/ml
+0.6
-1.7
-0.3
+0.7
-0.1
mixed community
RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.6
+1.1
-0.8
+0.9
-0.3
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.7
+0.4
-1.8
+0.2
+0.8
nitrogen source
Glucuronamide (N)
+0.8
-1.4
-0.2
+0.4
+0.8
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
+0.7
+1.6
-0.1
-1.3
phage
K. M5a1 KLEB23 MOI 1
-0.8
+0.3
-1.7
+1.7
+0.9
rhizosphere
rhizosphere EcoFAB sample 3; outgrowth in LB
+0.8
+0.6
-2.1
-0.3
+1.5
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
+1.0
+0.6
-1.0
+0.4
-0.4
micoeukaryotes
Dictyostellum sp.mixed culture-1
+0.1
-0.8
+1.4
+0.6
-0.6
phage
K. M5a1 KLEB23 MOI 1
+0.2
+0.7
-1.5
+1.9
+0.6
phage
K. M5a1 KLEB23 MOI 10
-0.5
-0.8
+1.1
+1.4
+1.1
stress
Nickel (II) chloride 1.5 mM
-0.4
+0.0
-0.0
+0.8
+2.0
carbon source
Gly-Glu (C)
+1.5
-0.1
+0.9
+0.6
-0.1
stress
Cobalt chloride 0.5 mM
+0.5
+0.8
+0.5
+0.5
+2.0
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