Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS16505 and BWI76_RS16510 are separated by 551 nucleotidesBWI76_RS16510 and BWI76_RS16515 are separated by 18 nucleotidesBWI76_RS16515 and BWI76_RS16520 are separated by 111 nucleotidesBWI76_RS16520 and BWI76_RS16525 are separated by 298 nucleotides BWI76_RS16505: BWI76_RS16505 - MFS transporter, at 3,420,784 to 3,421,950 _RS16505 BWI76_RS16510: BWI76_RS16510 - transcriptional repressor PurR, at 3,422,502 to 3,423,527 _RS16510 BWI76_RS16515: BWI76_RS16515 - LysR family transcriptional regulator, at 3,423,546 to 3,424,457 _RS16515 BWI76_RS16520: BWI76_RS16520 - Bcr/CflA family multidrug efflux MFS transporter, at 3,424,569 to 3,425,753 _RS16520 BWI76_RS16525: BWI76_RS16525 - cyclopropane-fatty-acyl-phospholipid synthase, at 3,426,052 to 3,427,203 _RS16525
Group Condition BWI76_RS16505 BWI76_RS16510 BWI76_RS16515 BWI76_RS16520 BWI76_RS16525
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.2 +0.3 -3.7 -2.7 -1.6
carbon source Inosine (C) -0.3 -0.3 -3.6 -2.6 +0.2
carbon source Inosine (C) -0.1 +0.1 -2.1 -4.2 +0.4
carbon source 2-Deoxyadenosine 4 mM (C) +0.1 -0.1 -1.7 -3.2 -0.7
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 +0.0 -2.3 -2.9 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 -0.1 -1.0 -2.5 -0.5
phage KLEB1 MOI 10 -0.5 +0.4 -3.3 -0.2 +0.0
phage K. M5a1 KLEB26 MOI 0.1 -0.5 +0.6 -4.1 +0.3 +0.3
carbon source 2-Deoxyadenosine 4 mM (C) -0.1 +0.1 -1.4 -2.4 +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.2 +0.1 -0.8 -0.6 -1.5
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 +0.2 -1.3 -1.7 +0.2
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 +0.6 -1.2 -2.0 +0.0
phage KLEB20 MOI 1 +0.9 -0.7 -2.4 +0.2 -0.4
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.0 +0.5 -2.3 +0.4 -0.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -0.2 +0.7 +0.0 -0.3 -2.3
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.3 +1.2 -4.0 -0.1 +0.7
stress Chloramphenicol 0.001 mg/ml +0.6 -1.7 -0.3 +0.7 -0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.6 +1.1 -0.8 +0.9 -0.3
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.7 +0.4 -1.8 +0.2 +0.8
nitrogen source Glucuronamide (N) +0.8 -1.4 -0.2 +0.4 +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 +0.7 +1.6 -0.1 -1.3
phage K. M5a1 KLEB23 MOI 1 -0.8 +0.3 -1.7 +1.7 +0.9
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB +0.8 +0.6 -2.1 -0.3 +1.5
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +1.0 +0.6 -1.0 +0.4 -0.4
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.1 -0.8 +1.4 +0.6 -0.6
phage K. M5a1 KLEB23 MOI 1 +0.2 +0.7 -1.5 +1.9 +0.6
phage K. M5a1 KLEB23 MOI 10 -0.5 -0.8 +1.1 +1.4 +1.1
stress Nickel (II) chloride 1.5 mM -0.4 +0.0 -0.0 +0.8 +2.0
carbon source Gly-Glu (C) +1.5 -0.1 +0.9 +0.6 -0.1
stress Cobalt chloride 0.5 mM +0.5 +0.8 +0.5 +0.5 +2.0
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