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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS16490 and BWI76_RS16495 are separated by 339 nucleotides
BWI76_RS16495 and BWI76_RS16500 are separated by 121 nucleotides
BWI76_RS16500 and BWI76_RS16505 are separated by 56 nucleotides
BWI76_RS16505 and BWI76_RS16510 are separated by 551 nucleotides
BWI76_RS16490: BWI76_RS16490 - glutaredoxin, at 3,418,483 to 3,418,830
_RS16490
BWI76_RS16495: BWI76_RS16495 - endopeptidase, at 3,419,170 to 3,420,024
_RS16495
BWI76_RS16500: BWI76_RS16500 - superoxide dismutase [Fe], at 3,420,146 to 3,420,727
_RS16500
BWI76_RS16505: BWI76_RS16505 - MFS transporter, at 3,420,784 to 3,421,950
_RS16505
BWI76_RS16510: BWI76_RS16510 - transcriptional repressor PurR, at 3,422,502 to 3,423,527
_RS16510
Group
Condition
BWI76
_RS16490
BWI76
_RS16495
BWI76
_RS16500
BWI76
_RS16505
BWI76
_RS16510
stress
Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
-5.1
-0.1
-0.4
+0.0
+0.6
stress
Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL
-4.7
+0.6
-0.6
+0.2
-0.2
mixed community
LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
-2.1
-0.1
-1.3
-0.7
-0.2
mixed community
LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
-3.3
+0.3
-1.3
+0.4
+0.1
mixed community
RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-3.2
+0.6
-0.4
+0.0
-0.6
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
-3.9
+0.5
-0.4
+0.1
+0.2
phage
KLEB1 MOI 10
+0.3
-2.3
-0.3
-0.3
-0.8
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
-3.3
+0.4
-0.8
+0.2
+0.0
stress
Nickel (II) chloride 1.5 mM
-3.4
-0.1
+0.5
-0.4
+0.0
phage
KLEB1 MOI 0.1
-0.0
-0.2
-2.3
+0.4
-1.1
mixed community
LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
-2.9
-0.1
+0.5
-1.0
+0.6
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
-3.1
+0.2
-0.4
+0.3
+0.2
mixed community
RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-1.5
-0.0
-2.2
-0.4
+1.3
stress
Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM
-1.7
+0.5
-1.3
-0.2
+0.4
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
-3.2
+0.3
+0.2
+0.5
+0.3
stress
Cobalt chloride 0.5 mM
-0.7
-1.1
-1.2
+0.5
+0.8
stress
Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM
-2.6
+0.2
-0.4
+0.3
+0.7
stress
Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL
-2.2
+0.1
-0.8
+0.5
+0.8
mixed community
RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-1.5
+0.8
+0.2
-1.1
+0.2
phage
KLEB17 MOI 1
-0.7
-1.4
+0.7
+0.5
-0.4
mixed community
RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-2.4
+0.1
+0.0
+0.6
+0.7
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
-0.5
+0.4
-1.6
+0.7
+0.4
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
-1.0
+0.7
+0.5
+0.4
-1.0
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-1.6
+0.7
-0.3
-0.2
+1.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.1
+1.3
+0.2
-0.3
-1.6
nitrogen source
Glucuronamide (N)
+0.1
+0.4
+1.2
+0.8
-1.4
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-1.2
+0.5
+0.3
+1.0
+0.6
stress
perchlorate 100 mM
+2.1
+1.2
+0.7
+0.3
+0.6
stress
Paraquat dichloride 0.1 mg/ml
+4.1
+0.3
+0.8
+0.8
+0.5
stress
Paraquat dichloride 0.1 mg/ml
+4.4
+0.5
+0.3
+0.3
+1.2
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