Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS16285	BWI76_RS16290	BWI76_RS16295	BWI76_RS16300	BWI76_RS16305
stress	RCH2_defined_1percent_glucose with Chloride 600 mM	-0.3	-0.9	+0.2	-0.8	-0.2
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.0	-0.8	-0.3	-1.1	+0.2
phage	KLEB13 MOI 0.1	+0.3	-0.6	-0.8	-1.2	+0.2
phage	K. M5a1 KLEB26 MOI 0.1	+0.2	+0.5	-2.5	+0.4	-0.4
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.5	+0.5	-0.1	-1.3	-0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.5	+0.1	-0.4	-1.0	+0.3
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	+0.4	-2.8	-0.0	+1.1	-0.2
phage	KLEB1 MOI 10	+0.2	-1.6	-0.3	+0.4	+0.1
stress	nitrite 20 mM	+0.3	-0.8	-0.8	+0.5	+0.1
phage	KLEB14 MOI 0.1	+0.3	+0.7	-0.4	-0.9	-0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-0.6	+1.0	-0.7	+0.3
phage	K. M5a1 KLEB23 MOI 1	-0.3	+1.0	-0.0	-0.9	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	-0.5	-0.2	+1.3	+0.1
phage	K. M5a1 KLEB23 MOI 10	-0.0	-0.9	+0.6	+0.2	+0.6
stress	Chloramphenicol 0.001 mg/ml	-0.1	+1.4	+0.2	-1.0	+0.0
stress	Cobalt chloride 0.5 mM	-0.2	+0.6	+0.8	-0.8	+0.2
stress	Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL	-0.9	+0.7	+0.1	+0.4	+0.2
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-0.2	+0.2	-0.4	+1.4	+0.1
phage	K. M5a1 KLEB23 MOI 10	-0.4	+0.9	-0.3	+0.8	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	-0.6	+1.0	+0.1	+0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.5	+0.4	+0.5	+0.9	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.1	+0.9	+0.2	+0.8	-0.3
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	+0.1	+1.1	+0.4	+0.5	-0.3
carbon source	acetate (C)	-0.1	+0.7	+0.5	+0.9	-0.2
phage	KLEB17 MOI 1	+0.7	+0.9	+0.1	+0.6	-0.4
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and 2,2'-Dipyridyl 50 uM	-0.2	+0.9	+0.6	+0.8	-0.1
phage	K. M5a1 KLEB22 MOI 10	-0.2	+0.8	+0.1	+1.0	+0.3
carbon source	Gly-Glu (C)	+0.6	-1.0	+0.3	+1.8	+0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.3	+0.4	+0.5	+1.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.1	+2.9	-0.2	-0.4	+0.2