Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS16045	BWI76_RS16050	BWI76_RS16055	BWI76_RS16060	BWI76_RS16065
phage	K. M5a1 KLEB23 MOI 10	N.D.	-0.5	-1.1	-0.2	-0.3
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	N.D.	+0.6	+0.3	+0.1	-1.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	N.D.	-0.1	+0.7	-0.6	-0.1
carbon source	L-Malic (C)	N.D.	+0.6	+0.4	-0.1	-0.7
phage	KLEB29 MOI 1	N.D.	+0.5	+0.4	-0.7	+0.0
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL	N.D.	-0.5	+0.7	+0.3	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	+0.1	+0.9	-0.3	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	-0.4	+0.9	-0.4	+0.2
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	-0.7	+0.4	+0.6	-0.1
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	N.D.	+0.5	+0.6	-0.5	-0.3
mixed community	LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	+0.2	+0.8	-0.3	-0.3
nitrogen source	Uridine (N)	N.D.	-0.4	+0.8	+0.5	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+1.0	-0.1	-0.4	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	+0.5	+0.7	-0.2	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	N.D.	+0.6	+0.7	+0.0	-0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	N.D.	+0.6	+0.6	-0.2	-0.2
carbon source	RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 0.1 x	N.D.	+0.5	+0.8	+0.2	-0.2
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	N.D.	+0.8	+0.8	+0.2	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.1	+1.4	+0.1	-0.0
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL	N.D.	+0.4	+1.0	+0.5	-0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	+0.3	+0.8	+0.4	-0.1
carbon source	D,L-Malic Acid (C)	N.D.	+1.1	+1.6	-0.6	-0.5
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	N.D.	+0.2	+0.8	+0.4	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	+0.2	+1.0	+0.3	+0.0
stress	Sisomicin 0.008 mg/ml	N.D.	+0.7	+0.3	+0.1	+0.5
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	N.D.	+0.7	+1.1	+0.1	-0.2
carbon source	Gly-Glu (C)	N.D.	+1.7	+0.2	-0.5	+0.2
phage	KLEB17 MOI 1	N.D.	+0.8	+0.6	+0.5	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+1.0	+0.1	+0.5	+0.3
carbon source	D,L-Malic Acid (C)	N.D.	+1.2	+1.5	-0.1	-0.4