Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS15210	BWI76_RS15215	BWI76_RS15220	BWI76_RS15225	BWI76_RS15230
phage	K. M5a1 KLEB26 MOI 0.1	-2.6	-0.9	-1.8	-1.3	-2.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2	-1.2	-0.8	-3.7	-1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5	+0.8	-0.4	-6.3	-1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	+0.4	+0.2	-5.8	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-4.6	+0.2	-2.6	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.3	-0.0	-5.6	-1.2
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.9	-0.4	+0.5	-4.4	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.1	+0.1	+0.1	-4.6	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.1	-2.6	-0.5	-1.8	-0.5
nitrogen source	L-Arginine (N)	-0.3	-5.2	+0.3	+0.2	-0.3
nitrogen source	Glucuronamide (N)	-0.2	-5.2	-0.1	+0.4	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	+0.3	-0.4	+0.2	-4.8	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.5	+0.1	-0.1	-4.3	-1.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	+0.1	-1.7	+0.3	-3.3	-0.3
lb dilute	Dilute LB (1/2)	-0.2	-1.4	+0.3	-3.2	-0.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	+0.3	-1.8	-0.1	-3.0	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.5	-1.9	-0.4	-3.8	+0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	+0.8	-1.4	+0.0	-3.3	-0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.1	-4.4	+0.6	-0.3	-0.1
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.0	+0.5	-0.0	-4.8	+0.2
stress	Cobalt chloride 0.5 mM	-0.1	-3.9	-0.6	+0.4	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.9	-1.1	-0.1	-3.3	+0.3
nitrogen source	Gly-DL-Asp (N)	+0.9	-4.9	-0.4	+0.3	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.8	-0.1	+1.1	-3.7	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+2.2	-0.4	+0.5	-5.0	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.2	+1.3	-0.4	-3.0	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7	+0.7	+0.3	-2.4	-1.6
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.8	+2.1	-0.5	-2.4	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.8	-0.0	+2.2	-3.8	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	+5.5	+0.7	-2.3	-0.1