Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS14995 and BWI76_RS15000 are separated by 8 nucleotidesBWI76_RS15000 and BWI76_RS15005 are separated by 335 nucleotidesBWI76_RS15005 and BWI76_RS15010 are separated by 71 nucleotidesBWI76_RS15010 and BWI76_RS15015 are separated by 41 nucleotides BWI76_RS14995: BWI76_RS14995 - amino acid ABC transporter permease, at 3,141,755 to 3,142,453 _RS14995 BWI76_RS15000: BWI76_RS15000 - amino acid ABC transporter ATP-binding protein, at 3,142,462 to 3,143,202 _RS15000 BWI76_RS15005: BWI76_RS15005 - hypothetical protein, at 3,143,538 to 3,143,747 _RS15005 BWI76_RS15010: BWI76_RS15010 - hypothetical protein, at 3,143,819 to 3,144,007 _RS15010 BWI76_RS15015: BWI76_RS15015 - DUF2132 domain-containing protein, at 3,144,049 to 3,144,324 _RS15015
Group Condition BWI76_RS14995 BWI76_RS15000 BWI76_RS15005 BWI76_RS15010 BWI76_RS15015
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x -0.3 -1.3 +0.1 -0.6 -5.0
phage K. M5a1 KLEB26 MOI 0.1 +0.5 -0.3 -0.5 -0.0 -5.0
stress Cobalt chloride 0.5 mM -0.5 -0.2 +0.4 +0.4 -5.1
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.4 -1.4 +0.0 -0.4 -2.8
phage K. M5a1 KLEB23 MOI 1 -0.4 -0.5 +0.1 +0.1 -3.5
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.2 -1.1 -0.1 -0.3 -2.3
phage KLEB30 MOI 1 -0.7 -0.1 +0.0 -0.3 -2.8
mixed community RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.1 -0.1 +0.1 -0.6 -2.7
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.2 -2.2 -0.3 -0.4 -0.2
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL -0.4 -0.5 -0.3 -0.1 -2.0
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.0 -1.4 +0.1 -0.3 -1.7
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM -0.4 -0.5 -0.4 +0.1 -2.0
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x -0.7 -1.6 -0.1 -0.7 +0.1
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.9 -0.3 -0.0 -0.0
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL -0.2 -0.3 -0.1 -0.4 -1.8
mixed community LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL -0.2 -2.6 +0.0 -0.0 +0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.1 -0.9 -0.1 -0.2 -1.7
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.1 -1.1 +0.0 -0.4 -1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.0 -0.4 +0.2 -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.1 -2.7 -0.3 -0.1 +0.8
stress Sisomicin 0.008 mg/ml +0.3 -0.4 -0.3 -0.1 -1.6
supernatant control Vogels_fungal_media; pH 5.5 +0.1 +0.3 -0.2 +0.0 -2.3
phage KLEB13 MOI 0.1 -0.6 -0.4 +0.4 +0.1 -1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 -1.4 -0.2 +0.1 +0.8
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.4 -1.1 -0.3 -0.3 +1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.1 +1.0 -0.1 -0.0 -1.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 +1.7 +0.2 +0.3 -0.5
nitrogen source L-Threonine (N) -0.0 -0.5 -0.2 +0.1 +2.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.0 +0.1 +0.3 +2.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.2 +0.0 +0.2 +2.7
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