Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS14870	BWI76_RS14875	BWI76_RS14880	BWI76_RS14885	BWI76_RS14890
phage	K. M5a1 KLEB26 MOI 0.1	-1.0	-0.1	-0.9	-0.2	-2.3
nitrogen source	Uridine (N)	-2.7	+0.2	-0.2	-0.3	-0.3
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-1.4	+0.4	-0.1	-0.5	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.6	-0.1	-0.3	-0.1	-0.5
stress	nitrite 20 mM	-1.3	-0.0	-0.6	+0.1	-0.6
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-1.9	+0.1	-0.2	-0.0	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-1.7	+0.2	-0.7	-0.2	+0.2
nitrogen source	Thymine (N)	-2.2	+0.1	-0.0	-0.1	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.3	+0.2	-0.3	-0.2	-0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-1.2	+0.2	-0.5	-0.2	-0.2
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	-1.4	+0.1	-0.2	-0.3	+0.3
phage	KLEB20 MOI 1	-1.6	+0.2	-0.3	+0.0	+0.2
nitrogen source	Glucuronamide (N)	-1.5	-0.2	+0.3	-0.2	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.8	+0.4	-0.8	-0.3	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.8	+0.2	+0.1	-0.1	+0.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.7	+0.1	-0.9	-0.2	+0.5
nitrogen source	L-Arginine (N)	-1.4	-0.2	-0.2	-0.2	+0.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x	-0.7	+0.3	-0.6	-0.3	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.3	+0.8	-0.2	-0.0	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.9	+0.3	-0.5	-0.0	+0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-1.0	+1.2	-0.1	-0.1	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.9	+0.7	-0.3	+0.1	+0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.7	+0.1	-0.8	-0.3	+0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.9	+0.4	-0.6	-0.4	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+1.2	-0.1	-0.4	-0.3	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.7	-0.4	-0.2	-0.0	-0.3
phage	KLEB1 MOI 10	-0.1	+0.3	-0.6	+0.3	+1.0
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	+1.0	+0.4	-0.5	-0.1	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+2.0	+0.2	-0.6	-0.0	-0.3
phage	K. M5a1 KLEB22 MOI 1	+1.0	+0.7	+0.3	+0.2	+0.2