Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS14790 and BWI76_RS14795 are separated by 146 nucleotidesBWI76_RS14795 and BWI76_RS14800 are separated by 45 nucleotidesBWI76_RS14800 and BWI76_RS14805 are separated by 302 nucleotidesBWI76_RS14805 and BWI76_RS14810 are separated by 4 nucleotides BWI76_RS14790: BWI76_RS14790 - 2-dehydropantoate 2-reductase, at 3,101,209 to 3,102,102 _RS14790 BWI76_RS14795: BWI76_RS14795 - hypothetical protein, at 3,102,249 to 3,102,473 _RS14795 BWI76_RS14800: BWI76_RS14800 - non-heme chloroperoxidase, at 3,102,519 to 3,103,355 _RS14800 BWI76_RS14805: BWI76_RS14805 - hypothetical protein, at 3,103,658 to 3,104,092 _RS14805 BWI76_RS14810: BWI76_RS14810 - carboxymuconolactone decarboxylase, at 3,104,097 to 3,104,897 _RS14810
Group Condition BWI76_RS14790 BWI76_RS14795 BWI76_RS14800 BWI76_RS14805 BWI76_RS14810
phage KLEB16 MOI 10 N.D. N.D. -1.4 -0.9 -0.4
nitrogen source Uridine (N) N.D. N.D. -0.2 -2.3 +0.2
nitrogen source L-tyrosine (N) N.D. N.D. +0.1 -1.2 -1.1
phage K. M5a1 KLEB23 MOI 10 N.D. N.D. -1.9 +0.4 -0.7
phage KLEB29 MOI 1 N.D. N.D. +0.0 -1.2 -0.7
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. -0.6 -1.3 +0.4
phage KLEB15 MOI 1 N.D. N.D. +0.4 -1.4 -0.2
carbon source Gly-Glu (C) N.D. N.D. -1.2 -0.4 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -0.6 -1.0 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.5 -0.9 +0.7
phage KLEB1 MOI 10 N.D. N.D. +0.7 -1.2 -0.1
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days N.D. N.D. +0.5 -1.2 +0.2
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL N.D. N.D. -0.3 +1.5 -0.6
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM N.D. N.D. +0.6 +0.7 -0.5
mixed community LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL N.D. N.D. +0.4 +1.3 -0.8
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. +0.3 +1.2 -0.4
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL N.D. N.D. +0.3 +1.5 -0.5
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM N.D. N.D. -0.3 +1.8 -0.2
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL N.D. N.D. +0.5 +1.1 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. +1.0 +1.2 -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. N.D. +0.3 +1.5 -0.1
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL N.D. N.D. +0.7 +1.4 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +2.3 -0.2 -0.3
micoeukaryotes Dictyostellum sp.mixed culture-2 N.D. N.D. +0.9 +0.5 +0.5
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x N.D. N.D. +0.7 +1.0 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +1.7 +0.0 +0.3
stress Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL N.D. N.D. +0.5 +1.3 +0.4
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB N.D. N.D. +0.4 +1.2 +0.7
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL N.D. N.D. +1.4 +1.2 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. +0.3 +2.2 +0.5
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