Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS14705 and BWI76_RS14710 are separated by 919 nucleotidesBWI76_RS14710 and BWI76_RS14715 are separated by 49 nucleotidesBWI76_RS14715 and BWI76_RS14720 overlap by 20 nucleotidesBWI76_RS14720 and BWI76_RS14725 are separated by 87 nucleotides BWI76_RS14705: BWI76_RS14705 - SefA, at 3,087,495 to 3,088,040 _RS14705 BWI76_RS14710: BWI76_RS14710 - FAD-dependent oxidoreductase, at 3,088,960 to 3,090,282 _RS14710 BWI76_RS14715: BWI76_RS14715 - type I methionyl aminopeptidase, at 3,090,332 to 3,091,111 _RS14715 BWI76_RS14720: BWI76_RS14720 - hypothetical protein, at 3,091,092 to 3,091,310 _RS14720 BWI76_RS14725: BWI76_RS14725 - HxlR family transcriptional regulator, at 3,091,398 to 3,091,865 _RS14725
Group Condition BWI76_RS14705 BWI76_RS14710 BWI76_RS14715 BWI76_RS14720 BWI76_RS14725
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.5 +0.3 -1.2 N.D. -0.7
stress Chlorite 2.5 mM -0.4 -0.0 -1.1 N.D. -0.5
phage KLEB1 MOI 0.1 -0.6 -0.4 -0.3 N.D. -0.5
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml -0.8 +0.1 -0.7 N.D. -0.4
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -1.4 -0.0 -0.3 N.D. +0.0
phage KLEB29 MOI 1 -0.7 -0.5 -0.3 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.1 -0.8 N.D. -0.7
supernatant control Vogels_fungal_media; pH 5.5 +0.2 -0.2 -1.5 N.D. -0.1
nitrogen source L-Tryptophan (N) -0.6 -0.4 +0.4 N.D. -0.7
nitrogen source D-Alanine (N) +0.1 +0.2 -0.7 N.D. -0.9
nitrogen source Thymine (N) -0.9 -0.4 +0.5 N.D. -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 +0.6 -0.3 N.D. -1.0
nitrogen source D-Serine (N) -0.6 +0.2 +0.1 N.D. -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 -0.8 +0.0 N.D. -0.8
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.2 +0.2 -0.9 N.D. -0.4
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x +0.4 -0.3 -0.2 N.D. -0.8
phage KLEB16 MOI 1 +0.4 -0.7 -0.5 N.D. +0.2
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.7 +0.3 +0.3 N.D. -0.5
nitrogen source Casamino Acids (N) -0.8 +0.1 +0.5 N.D. -0.4
carbon source RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x -1.1 -0.1 +0.5 N.D. +0.3
nitrogen source Uridine (N) -0.6 -0.2 +0.5 N.D. +0.4
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.5 +0.3 -0.6 N.D. +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.6 +0.8 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.1 +1.1 -0.4 N.D. -0.1
carbon source Gly-Glu (C) -0.1 +0.1 +1.4 N.D. -0.4
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.5 +0.6 +1.2 N.D. -0.3
stress Cobalt chloride 0.5 mM -0.4 +0.5 +0.7 N.D. +0.2
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL +0.2 +0.1 -0.3 N.D. +1.3
phage KLEB16 MOI 10 -0.5 +0.7 +0.6 N.D. +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.8 +1.0 N.D. -0.1
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