Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS14355 and BWI76_RS14360 are separated by 391 nucleotidesBWI76_RS14360 and BWI76_RS14365 are separated by 96 nucleotidesBWI76_RS14365 and BWI76_RS14370 overlap by 17 nucleotidesBWI76_RS14370 and BWI76_RS14375 are separated by 116 nucleotides BWI76_RS14355: BWI76_RS14355 - Low calcium response locus protein T, at 3,000,906 to 3,000,980 _RS14355 BWI76_RS14360: BWI76_RS14360 - hypothetical protein, at 3,001,372 to 3,001,932 _RS14360 BWI76_RS14365: BWI76_RS14365 - transcriptional regulator, at 3,002,029 to 3,002,361 _RS14365 BWI76_RS14370: BWI76_RS14370 - hypothetical protein, at 3,002,345 to 3,002,539 _RS14370 BWI76_RS14375: BWI76_RS14375 - hypothetical protein, at 3,002,656 to 3,003,090 _RS14375
Group Condition BWI76_RS14355 BWI76_RS14360 BWI76_RS14365 BWI76_RS14370 BWI76_RS14375
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x N.D. N.D. -0.0 -0.3 -4.3
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. -0.8 -0.2 -3.1
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. -0.5 -0.0 -2.7
phage KLEB1 MOI 10 N.D. N.D. +0.0 -0.1 -3.0
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. -0.9 -0.7 -1.3
phage KLEB16 MOI 0.1 N.D. N.D. -0.4 -0.1 -2.3
stress RCH2_defined_1percent_glucose with Betaine 100 uM N.D. N.D. -0.2 -0.0 -2.5
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. N.D. -0.9 -0.3 -1.5
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml N.D. N.D. -1.1 -0.0 -1.4
carbon source RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 0.1 x N.D. N.D. -0.4 -0.4 -1.7
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL N.D. N.D. -0.7 -0.1 -1.6
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days N.D. N.D. -0.4 -0.1 -2.0
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x N.D. N.D. -0.2 -0.3 -2.0
nitrogen source L-Cysteine (N) N.D. N.D. -0.0 +0.3 -2.6
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. N.D. -0.5 -0.5 -1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. N.D. -0.9 -0.3 -1.1
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml N.D. N.D. -0.5 -0.0 -1.6
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. -0.9 -0.2 -1.0
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM N.D. N.D. -0.5 -0.3 -1.3
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. N.D. -0.7 -0.0 -1.4
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. N.D. -0.2 -0.4 -1.4
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. -0.3 -0.3 -1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. -0.5 -0.7 -0.7
stress RCH2_defined_1percent_glucose with Chloride 100 mM N.D. N.D. -0.3 +0.1 -1.7
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +0.5 -0.3 -1.7
phage K. M5a1 KLEB26 MOI 0.1 N.D. N.D. +0.5 +0.6 -2.0
phage KLEB13 MOI 0.1 N.D. N.D. +0.6 +0.0 -1.4
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. -1.1 -0.2 +0.9
phage KLEB1 MOI 10 N.D. N.D. -0.7 +0.2 +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. +1.6 -0.1 +0.6
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