Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS14320	BWI76_RS14325	BWI76_RS14330	BWI76_RS14335	BWI76_RS14340
nitrogen source	Glucuronamide (N)	-4.4	-4.4	-0.2	+0.1	-0.1
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-3.2	-3.1	-1.3	-0.3	-0.6
nitrogen source	L-Phenylalanine (N)	-2.2	-4.4	-0.9	-0.1	+0.0
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-3.6	-1.8	-0.5	-0.1	-0.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-3.2	-2.2	-0.6	-0.0	-0.2
carbon source	RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x	-3.2	-2.1	-0.4	-0.3	-0.2
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-3.9	-1.1	-0.5	-0.3	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-2.9	-1.7	-0.8	-0.3	+0.0
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-3.5	-1.4	+0.0	-0.1	-0.6
nitrogen source	Glycine (N)	-4.7	-0.1	-0.4	-0.2	-0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-3.1	-0.6	-1.2	-0.2	-0.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-3.1	-1.5	-0.3	-0.3	-0.4
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-3.0	-1.1	-0.3	-0.4	-0.7
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-2.9	-1.6	-0.4	-0.0	-0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-3.1	-0.9	-0.3	-0.3	-0.7
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-3.4	-1.0	-0.3	-0.1	-0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-3.0	-1.0	-0.5	-0.2	-0.6
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-2.0	-1.6	-0.5	-0.3	-0.7
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-2.6	-1.7	-0.3	-0.1	-0.4
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-2.7	-0.9	-0.5	-0.3	-0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-3.3	-0.4	-0.8	-0.2	-0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-3.6	-0.0	-0.6	-0.2	-0.6
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and 2,2'-Dipyridyl 50 uM	-2.6	-1.1	-0.4	-0.2	-0.6
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.7	-4.0	-1.4	-0.2	+0.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-2.6	-0.6	-0.8	-0.3	-0.3
stress	Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM	-2.1	-1.1	-0.6	-0.2	-0.7
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-3.1	-0.9	-0.5	+0.1	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-3.5	-0.5	+0.1	-0.2	-0.3
phage	KLEB1 MOI 10	+2.0	-4.0	-0.1	-0.4	-0.2
phage	KLEB20 MOI 1	+1.6	-3.4	-0.8	+0.1	-0.2