Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS14185 and BWI76_RS14190 overlap by 4 nucleotidesBWI76_RS14190 and BWI76_RS14195 are separated by 128 nucleotidesBWI76_RS14195 and BWI76_RS14200 overlap by 4 nucleotidesBWI76_RS14200 and BWI76_RS14205 are separated by 13 nucleotides BWI76_RS14185: BWI76_RS14185 - 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase, at 2,969,036 to 2,969,749 _RS14185 BWI76_RS14190: BWI76_RS14190 - DNA-binding protein, at 2,969,746 to 2,970,486 _RS14190 BWI76_RS14195: BWI76_RS14195 - LysR family transcriptional regulator, at 2,970,615 to 2,971,838 _RS14195 BWI76_RS14200: BWI76_RS14200 - protocatechuate 4,5-dioxygenase, at 2,971,835 to 2,973,097 _RS14200 BWI76_RS14205: BWI76_RS14205 - aromatic acid/H+ symport family MFS transporter, at 2,973,111 to 2,974,480 _RS14205
Group Condition BWI76_RS14185 BWI76_RS14190 BWI76_RS14195 BWI76_RS14200 BWI76_RS14205
phage KLEB1 MOI 10 -0.2 -0.9 -0.9 -0.2 -0.8
phage KLEB1 MOI 0.1 -0.8 -0.6 -0.4 -0.1 -0.7
phage KLEB17 MOI 1 -1.8 +0.2 -0.5 -0.4 -0.2
phage KLEB17 MOI 0.1 -0.2 -0.6 -0.2 -1.1 -0.2
phage KLEB17 MOI 1 -1.0 -0.1 -0.2 -0.5 -0.2
phage KLEB1 MOI 0.1 -0.4 -0.0 -0.3 -0.9 -0.3
phage KLEB20 MOI 0.1 -0.5 -0.3 -0.5 +0.0 -0.3
nitrogen source Thymine (N) -0.3 -0.3 +0.0 -1.1 +0.1
nitrogen source Gly-DL-Asp (N) +0.2 -0.3 +0.0 -1.0 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -0.3 +0.1 +0.1 -0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.4 +0.0 -0.4 -0.9 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.2 +0.1 -0.8 -0.1
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.3 +0.1 +0.1 -0.8 +0.4
rhizosphere rhizosphere sample 1; outgrowth in LB -0.0 +0.3 +0.4 -0.8 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x -0.6 +0.3 +0.3 +0.3 -0.1
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.5 +0.2 +0.2 -0.9 +0.3
phage KLEB31 MOI 1 +0.5 -0.6 -0.1 +0.4 +0.1
carbon source D-Gluconic Acid (C) +0.3 +0.5 -0.1 -0.5 +0.1
carbon source succinate (C) +0.2 +0.6 +0.1 -0.6 +0.2
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL -0.2 -0.1 +0.2 +0.8 -0.3
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.2 +0.6 -0.3 +0.2 +0.3
nitrogen source L-Arginine (N) +0.4 +0.7 -0.4 +0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.2 -0.1 +1.3 -0.3
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB +0.6 +0.4 -0.3 +0.4 -0.1
stress Chloramphenicol 0.001 mg/ml +0.7 +0.5 -0.1 -0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.0 +0.1 +0.6 +1.1 -0.4
phage KLEB26 MOI0.1 +0.9 +0.2 -0.1 +0.3 +0.2
carbon source Gly-Glu (C) +0.9 +0.3 -0.2 -0.2 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 -0.1 -0.1 +0.9 +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +1.2 -0.2 +0.3 +0.1 +0.4
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BWI76_RS14185
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