Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS13770 and BWI76_RS13775 are separated by 9 nucleotidesBWI76_RS13775 and BWI76_RS13780 overlap by 4 nucleotidesBWI76_RS13780 and BWI76_RS13785 overlap by 4 nucleotidesBWI76_RS13785 and BWI76_RS13790 overlap by 4 nucleotides BWI76_RS13770: BWI76_RS13770 - alkylhydroperoxidase domain protein, at 2,870,997 to 2,872,088 _RS13770 BWI76_RS13775: BWI76_RS13775 - putative FMN-dependent luciferase-like monooxygenase, at 2,872,098 to 2,873,087 _RS13775 BWI76_RS13780: BWI76_RS13780 - ABC transporter ATP-binding protein, at 2,873,084 to 2,874,688 _RS13780 BWI76_RS13785: BWI76_RS13785 - ABC transporter permease, at 2,874,685 to 2,875,536 _RS13785 BWI76_RS13790: BWI76_RS13790 - peptide ABC transporter permease, at 2,875,533 to 2,876,477 _RS13790
Group Condition BWI76_RS13770 BWI76_RS13775 BWI76_RS13780 BWI76_RS13785 BWI76_RS13790
phage K. M5a1 KLEB26 MOI 0.1 -0.2 -1.9 -0.5 -3.3 -0.7
phage K. M5a1 KLEB23 MOI 10 -0.7 -2.2 -0.3 -2.3 -0.3
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL -0.8 -2.4 -0.2 -1.0 +0.4
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x -1.4 -1.0 +0.0 -1.0 -0.4
phage K. M5a1 KLEB23 MOI 10 +0.2 -1.0 -0.3 -2.4 -0.2
phage KLEB20 MOI 0.1 -0.1 -1.2 +0.2 -2.7 +0.3
carbon source 2'-Deoxycytidine 10 mM (C) +0.3 -0.9 -0.1 -2.2 -0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -1.3 -1.3 -0.1 -0.5 +0.1
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL -1.1 -1.6 -0.5 +0.1 +0.0
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.1 -0.7 +0.3 -2.6 +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.3 -1.0 -0.1 -1.7 -0.1
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.7 -1.0 +0.4 -1.1 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 +0.8 +0.1 -1.1 -0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.9 -1.0 +0.2 -0.6 +0.2
phage KLEB17 MOI 1 -0.3 +0.6 +0.0 -1.9 -0.3
stress Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL -0.9 -0.2 +0.3 -1.3 +0.4
mixed community RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.2 -0.1 +0.3 -2.6 +0.4
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM +0.3 -0.6 +0.2 -2.0 +0.4
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.0 -1.1 +0.4 -1.2 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x -0.2 -0.9 +0.4 -1.3 +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.3 +0.4 +0.0 -2.0 -0.3
phage K. M5a1 KLEB22 MOI 10 +0.5 +0.5 +0.1 -2.1 -0.4
nitrogen source Uridine (N) -0.5 +0.3 +0.6 -1.2 -0.5
nitrogen source Thymine (N) +0.1 +0.9 +0.1 -2.4 +0.1
nitrogen source L-tyrosine (N) +1.1 -0.8 -0.0 -1.1 +0.0
phage KLEB13 MOI 0.1 -0.0 -1.4 +0.1 +0.8 +0.7
phage K. M5a1 KLEB10 MOI 10 +1.0 -1.4 +0.0 +0.5 +0.6
ecofab LB in EcoFAB_10mL -0.1 +2.1 -0.2 -0.5 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +0.7 -0.3 -0.8 +0.5
nitrogen source D-Alanine (N) +0.3 +1.4 +0.0 +0.5 -0.9
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