Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS13680	BWI76_RS13685	BWI76_RS13690	BWI76_RS13695	BWI76_RS13700
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-3.3	-0.1	+0.0	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.9	-1.4	+0.2	-0.4	-0.6
phage	KLEB1 MOI 10	+0.7	-4.1	+0.6	-0.1	-0.0
phage	K. M5a1 KLEB26 MOI 0.1	+0.2	-3.9	+0.2	+0.6	+0.2
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.5	+0.0	-0.7	-1.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.3	-0.6	-0.5	-1.0	-0.6
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.7	-0.4	-0.1	-0.6	-0.5
phage	K. M5a1 KLEB10 MOI 10	-0.4	-1.1	-0.2	-0.3	+0.3
carbon source	2'-Deoxycytidine 10 mM (C)	+0.3	-1.9	-0.0	-0.1	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-1.1	-0.5	+0.2	+0.2	-0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.5	+0.5	+0.0	-1.0	-0.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and 2,2'-Dipyridyl 50 uM	-0.4	+0.7	+0.2	-1.1	-0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.3	+0.4	-0.2	-1.2	-0.1
phage	KLEB30 MOI 1	-0.2	-1.5	+0.2	+0.3	+0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.6	-0.6	+0.2	-1.0	+0.2
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.2	+0.6	-0.1	-0.7	-0.7
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.5	+0.8	+0.3	-0.4	-0.6
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-0.2	+1.1	-0.2	-0.5	-0.3
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.4	+0.9	-0.1	-0.8	-0.2
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.7	-0.2	+0.4	-1.0	+0.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.0	+1.1	+0.2	-0.8	-0.1
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.2	+1.4	-0.2	+0.2	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	+1.3	+0.1	+0.1	-0.6
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.5	+0.8	+0.1	-0.6	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+2.0	-0.1	+0.1	-0.2	-0.4
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+1.1	+0.9	+0.1	-1.1	+0.2
phage	KLEB20 MOI 1	+0.4	+1.3	-0.2	+0.3	-0.4
mixed community	LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.5	+0.9	-0.1	-0.3	+0.4
carbon source	RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x	+0.6	+1.4	-0.1	-0.3	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	+4.4	-0.2	+0.2	+0.3