Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS13365 and BWI76_RS13370 are separated by 94 nucleotidesBWI76_RS13370 and BWI76_RS13375 are separated by 248 nucleotidesBWI76_RS13375 and BWI76_RS13380 are separated by 11 nucleotidesBWI76_RS13380 and BWI76_RS13385 are separated by 168 nucleotides BWI76_RS13365: BWI76_RS13365 - GCN5-like N-acetyltransferase, at 2,787,783 to 2,788,208 _RS13365 BWI76_RS13370: BWI76_RS13370 - hypothetical protein, at 2,788,303 to 2,788,839 _RS13370 BWI76_RS13375: BWI76_RS13375 - protease, at 2,789,088 to 2,791,052 _RS13375 BWI76_RS13380: BWI76_RS13380 - hypothetical protein, at 2,791,064 to 2,791,297 _RS13380 BWI76_RS13385: BWI76_RS13385 - DUF2474 domain-containing protein, at 2,791,466 to 2,791,591 _RS13385
Group Condition BWI76_RS13365 BWI76_RS13370 BWI76_RS13375 BWI76_RS13380 BWI76_RS13385
nitrogen source D-Alanine (N) N.D. -1.2 +0.0 -0.9 N.D.
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB N.D. -1.4 -0.4 -0.2 N.D.
nitrogen source L-Cysteine (N) N.D. -1.0 -0.1 -0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. -1.1 -0.4 -0.4 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X N.D. -1.4 -0.3 -0.1 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. -0.3 -0.3 -1.1 N.D.
phage KLEB1 MOI 10 N.D. +0.6 -0.5 -1.4 N.D.
nitrogen source Glycine (N) N.D. -1.1 +0.4 -0.4 N.D.
supernatant control Vogels_fungal_media; pH 5.5 N.D. +0.5 -0.5 -0.8 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.7 -0.5 -1.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.9 -0.4 +0.5 N.D.
supernatant control Vogels_fungal_media; pH 5.5 N.D. +0.6 -0.3 -1.0 N.D.
phage KLEB29 MOI 1 N.D. +0.8 -0.3 -1.0 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. +0.5 +0.2 -1.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +1.0 +0.1 -1.1 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL N.D. +1.0 -0.2 -0.6 N.D.
nitrogen source Thymine (N) N.D. -0.1 -0.7 +1.1 N.D.
micoeukaryotes Tetrahymena sp., Mixed culture-1 N.D. +1.2 -0.5 -0.3 N.D.
phage KLEB20 MOI 1 N.D. -0.3 -0.4 +1.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. +0.5 +0.6 -0.5 N.D.
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB N.D. +0.5 -0.6 +0.7 N.D.
phage KLEB17 MOI 0.1 N.D. -0.5 +0.3 +0.9 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x N.D. +1.3 -0.2 -0.2 N.D.
mixed community LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL N.D. +0.4 -0.5 +1.0 N.D.
stress Cobalt chloride 0.5 mM N.D. +0.5 -0.6 +0.9 N.D.
phage K. M5a1 KLEB22 MOI 1 N.D. +1.3 -0.3 -0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +1.8 -0.3 +0.2 N.D.
phage K. M5a1 KLEB26 MOI 0.1 N.D. -0.1 +1.0 +0.9 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +1.9 -0.1 +0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +1.6 +0.4 +0.6 N.D.
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