Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS13000 and BWI76_RS13005 are separated by 358 nucleotidesBWI76_RS13005 and BWI76_RS13010 overlap by 4 nucleotidesBWI76_RS13010 and BWI76_RS13015 are separated by 415 nucleotidesBWI76_RS13015 and BWI76_RS13020 are separated by 96 nucleotides BWI76_RS13000: BWI76_RS13000 - hypothetical protein, at 2,711,638 to 2,712,438 _RS13000 BWI76_RS13005: BWI76_RS13005 - thiamine pyrophosphate protein TPP-binding protein, at 2,712,797 to 2,714,491 _RS13005 BWI76_RS13010: BWI76_RS13010 - LysR family transcriptional regulator, at 2,714,488 to 2,715,408 _RS13010 BWI76_RS13015: BWI76_RS13015 - LysR family transcriptional regulator, at 2,715,824 to 2,716,735 _RS13015 BWI76_RS13020: BWI76_RS13020 - NmrA family protein, at 2,716,832 to 2,717,821 _RS13020
Group Condition BWI76_RS13000 BWI76_RS13005 BWI76_RS13010 BWI76_RS13015 BWI76_RS13020
nitrogen source L-Valine (N) +0.0 -1.2 -1.4 -0.2 +0.1
phage KLEB20 MOI 1 -0.1 -0.4 -1.8 +0.4 -0.6
phage KLEB1 MOI 0.1 -0.6 -0.5 -0.1 -0.6 -0.4
phage KLEB17 MOI 1 -0.2 -0.6 -0.4 -0.1 -0.9
phage KLEB24 MOI 1 -0.5 -0.2 -0.8 +0.1 -0.8
phage KLEB20 MOI 0.1 -0.5 -0.0 -0.3 -0.7 -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.6 +0.1 -0.4 -0.7 -0.4
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml -0.2 +0.2 -0.4 -0.5 -0.9
phage KLEB17 MOI 1 -0.7 -0.2 +0.1 +0.1 -1.1
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.6 +0.2 -0.5 -0.2 -0.6
phage K. M5a1 KLEB22 MOI 10 -0.7 -0.3 -0.2 +0.4 -0.7
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x -0.7 +0.2 -1.1 -0.2 +0.5
phage KLEB14 MOI 0.1 -0.3 +0.1 +0.4 -0.7 -0.7
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.6 +0.3 -1.0 +0.2 -0.1
phage K. M5a1 KLEB26 MOI 0.1 -0.1 -0.3 +1.2 -1.4 -0.4
phage KLEB1 MOI 10 -0.3 +0.2 -1.8 +0.4 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +0.3 -0.7 -0.6 -0.2
phage KLEB29 MOI 0.1 -0.1 +0.2 -0.4 +0.4 -0.9
phage KLEB30 MOI 1 -0.3 +0.3 -0.0 +0.5 -0.9
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x +0.6 +0.3 -0.6 -0.5 -0.1
phage KLEB31 MOI 1 +0.2 -0.3 -0.4 +0.7 -0.5
phage KLEB15 MOI 1 -0.4 -0.3 +0.9 -0.1 -0.3
phage K. M5a1 KLEB23 MOI 1 +0.2 -0.2 -0.2 +0.9 -0.5
stress Sisomicin 0.008 mg/ml -0.3 +0.2 +0.2 -0.6 +0.8
stress Cobalt chloride 0.5 mM +0.1 +0.0 +0.3 +1.4 -0.2
carbon source 2'-Deoxyinosine 5 mM (C) +0.3 +0.0 -0.3 +0.8 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +0.6 -0.3 +1.1 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 -0.1 +0.7 -0.2 +1.2
nitrogen source D-Alanine (N) +0.5 +0.3 +0.4 +1.0 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.0 +1.1 +0.5 +0.6
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