Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS12530	BWI76_RS12535	BWI76_RS12540	BWI76_RS12545	BWI76_RS12550
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.4	-2.2	N.D.	-1.8	-0.6
stress	Cobalt chloride 0.5 mM	+0.1	-2.1	N.D.	-0.4	-0.9
phage	K. M5a1 KLEB23 MOI 1	-0.6	-0.8	N.D.	-0.1	-1.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.2	-1.2	N.D.	-1.4	+0.4
phage	K. M5a1 KLEB22 MOI 10	-0.2	+0.5	N.D.	-0.2	-1.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.2	-1.2	N.D.	-0.7	+0.6
mixed community	LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.2	-0.6	N.D.	-1.1	+0.6
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.2	-0.9	N.D.	-0.9	+0.6
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-0.4	-1.0	N.D.	-0.3	+0.8
mixed community	LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.0	-1.7	N.D.	-0.0	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.2	-0.7	N.D.	-1.1	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+0.8	N.D.	-0.5	-0.9
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.2	-1.0	N.D.	-0.6	+1.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.1	-1.0	N.D.	-0.3	+1.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.0	-0.9	N.D.	-0.5	+1.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.3	-1.1	N.D.	+0.2	+1.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.2	-1.0	N.D.	+0.4	+0.8
phage	K. M5a1 KLEB23 MOI 10	-0.4	-1.0	N.D.	+0.5	+0.9
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.3	-1.3	N.D.	+0.7	+1.2
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.5	-0.6	N.D.	+0.6	+0.9
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-0.2	-1.0	N.D.	+0.5	+1.1
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-0.2	-1.1	N.D.	+0.8	+1.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.1	-1.2	N.D.	+1.1	+0.8
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.4	-0.4	N.D.	+1.2	+0.7
phage	KLEB1 MOI 10	+0.4	-0.6	N.D.	-0.2	+1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2	+1.1	N.D.	+1.0	-0.6
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.1	-0.4	N.D.	+0.9	+1.3
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.2	-0.5	N.D.	+0.6	+2.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.2	+2.2	N.D.	+0.4	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	+0.6	N.D.	+1.8	+1.7