Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS12380	BWI76_RS12385	BWI76_RS12390	BWI76_RS12395	BWI76_RS12400
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.5	-1.2	-1.3	-0.6	-2.2
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-1.2	-1.2	-1.3	-0.4	-1.1
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-0.7	-1.7	-0.9	-0.7	-1.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-1.1	-1.2	-0.0	-0.7	-2.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	-0.1	-3.0	-0.3	-1.0
mixed community	LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.7	-0.9	-2.3	-0.3	-0.7
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-1.0	-0.8	-1.0	-0.8	-1.1
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.4	-1.1	-0.9	-0.6	-1.8
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.9	-0.7	-0.8	-1.0	-1.3
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.9	-1.3	-0.7	-0.5	-1.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.8	-1.0	-1.1	-0.7	-1.1
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-1.2	-1.1	+0.1	-0.8	-1.7
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.7	-0.8	-0.8	-0.8	-1.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.9	-1.1	-0.6	-0.8	-1.3
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.7	-1.2	+1.0	-0.7	-3.0
stress	Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL	-1.0	-1.0	-0.5	-0.9	-1.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.9	-1.0	-1.0	-0.7	-1.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.9	-0.8	-0.6	-1.1	-1.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.2	-0.6	-0.6	-1.1	-2.0
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-0.7	-1.0	-0.3	-0.9	-1.6
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.7	-1.2	-0.7	-0.9	-1.0
stress	Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL	-0.9	-0.9	-0.9	-0.6	-1.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.6	-1.2	-0.9	-0.5	-1.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.8	-1.1	-1.2	-0.8	-0.6
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-0.9	-0.8	-0.5	-0.8	-1.3
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.9	-1.1	-0.6	-0.8	-1.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.8	-1.1	+0.3	-0.6	-2.1
phage	KLEB17 MOI 1	-0.7	+0.9	-1.4	+0.8	-0.8
carbon source	a-Cyclodextrin (C)	+1.3	+1.8	+1.6	+1.4	+1.0
carbon source	a-Cyclodextrin (C)	+1.6	+1.8	+1.0	+1.3	+1.5