Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS12115 and BWI76_RS12120 overlap by 8 nucleotidesBWI76_RS12120 and BWI76_RS12125 are separated by 0 nucleotidesBWI76_RS12125 and BWI76_RS12130 overlap by 1 nucleotidesBWI76_RS12130 and BWI76_RS12135 overlap by 4 nucleotides BWI76_RS12115: BWI76_RS12115 - hypothetical protein, at 2,542,927 to 2,543,130 _RS12115 BWI76_RS12120: BWI76_RS12120 - hypothetical protein, at 2,543,123 to 2,543,308 _RS12120 BWI76_RS12125: BWI76_RS12125 - hypothetical protein, at 2,543,309 to 2,543,521 _RS12125 BWI76_RS12130: BWI76_RS12130 - hypothetical protein, at 2,543,521 to 2,543,778 _RS12130 BWI76_RS12135: BWI76_RS12135 - C-5 cytosine-specific DNA methylase, at 2,543,775 to 2,545,757 _RS12135
Group Condition BWI76_RS12115 BWI76_RS12120 BWI76_RS12125 BWI76_RS12130 BWI76_RS12135
phage KLEB17 MOI 1 -0.0 N.D. -2.3 N.D. -1.1
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -0.8 N.D. -1.6 N.D. -0.8
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.3 N.D. -1.7 N.D. -0.8
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.7 N.D. -1.4 N.D. -0.6
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.5 N.D. -1.7 N.D. -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 N.D. -1.1 N.D. -0.8
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL -0.5 N.D. -1.1 N.D. -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 N.D. -0.6 N.D. -0.8
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.8 N.D. -1.1 N.D. -0.6
stress Benzalkonium Chloride 0.004mg/ml -1.0 N.D. -0.9 N.D. -0.5
stress Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM -0.5 N.D. -1.3 N.D. -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 N.D. -1.1 N.D. -0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7 N.D. -0.8 N.D. -0.8
supernatant control Vogels_fungal_media 0.1X -0.5 N.D. -0.7 N.D. -1.0
mixed community LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL -0.3 N.D. -1.3 N.D. -0.6
phage KLEB17 MOI 0.1 -0.7 N.D. -1.9 N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 N.D. -0.7 N.D. -1.0
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -0.8 N.D. -1.3 N.D. +0.0
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL -0.4 N.D. -1.2 N.D. -0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.7 N.D. -0.7 N.D. -0.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.5 N.D. -1.0 N.D. -0.7
phage K. M5a1 KLEB23 MOI 10 +0.5 N.D. -1.6 N.D. -0.5
nitrogen source L-Phenylalanine (N) +0.4 N.D. -1.4 N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 N.D. +1.0 N.D. -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 N.D. +2.5 N.D. -0.5
stress nitrite 20 mM +0.9 N.D. +0.5 N.D. +1.0
stress nitrite 40 mM +1.0 N.D. +1.0 N.D. +0.6
carbon source a-Cyclodextrin (C) +1.1 N.D. +0.9 N.D. +1.4
carbon source a-Cyclodextrin (C) +1.3 N.D. +1.3 N.D. +1.4
stress nitrite 40 mM +1.0 N.D. +2.4 N.D. +0.9
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