Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS11945 and BWI76_RS11950 are separated by 161 nucleotidesBWI76_RS11950 and BWI76_RS11955 are separated by 135 nucleotidesBWI76_RS11955 and BWI76_RS11960 are separated by 6 nucleotidesBWI76_RS11960 and BWI76_RS11965 are separated by 191 nucleotides BWI76_RS11945: BWI76_RS11945 - GTP cyclohydrolase II, at 2,516,068 to 2,516,658 _RS11945 BWI76_RS11950: BWI76_RS11950 - phosphatidylglycerophosphatase B, at 2,516,820 to 2,517,587 _RS11950 BWI76_RS11955: BWI76_RS11955 - hypothetical protein, at 2,517,723 to 2,518,031 _RS11955 BWI76_RS11960: BWI76_RS11960 - lipopolysaccharide assembly protein LapB, at 2,518,038 to 2,519,207 _RS11960 BWI76_RS11965: BWI76_RS11965 - orotidine-5'-phosphate decarboxylase, at 2,519,399 to 2,520,136 _RS11965
Group Condition BWI76_RS11945 BWI76_RS11950 BWI76_RS11955 BWI76_RS11960 BWI76_RS11965
carbon source D-Glucose 20 mM (C) N.D. -0.5 N.D. N.D. -9.7
carbon source Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM N.D. -0.1 N.D. N.D. -9.5
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x N.D. -0.3 N.D. N.D. -9.1
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x N.D. -0.2 N.D. N.D. -9.1
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x N.D. -0.5 N.D. N.D. -8.8
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x N.D. -0.2 N.D. N.D. -9.0
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x N.D. -0.1 N.D. N.D. -9.0
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x N.D. -0.0 N.D. N.D. -9.1
carbon source RCH2_defined_glucose with MS_media 0.5x N.D. +0.2 N.D. N.D. -9.2
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x N.D. +0.1 N.D. N.D. -8.9
nitrogen source Parabanic Acid (N) N.D. -0.2 N.D. N.D. -8.6
supernatant control Vogels_fungal_media 0.1X N.D. -0.1 N.D. N.D. -8.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X N.D. -0.3 N.D. N.D. -8.4
nitrogen source Ammonium chloride (N) N.D. -0.1 N.D. N.D. -8.6
nitrogen source L-Alanine (N) N.D. -0.1 N.D. N.D. -8.5
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x N.D. +0.3 N.D. N.D. -8.9
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. +0.0 N.D. N.D. -8.6
supernatant control Vogels_fungal_media 0.1X N.D. +0.1 N.D. N.D. -8.6
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x N.D. -0.2 N.D. N.D. -8.3
nitrogen source L-Histidine (N) N.D. -0.2 N.D. N.D. -8.3
supernatant control Vogels_fungal_media; pH 5.5 N.D. -0.2 N.D. N.D. -8.3
nitrogen source Glycine (N) N.D. -0.2 N.D. N.D. -8.3
nitrogen source L-Asparagine (N) N.D. +0.1 N.D. N.D. -8.5
nitrogen source L-Glutamine (N) N.D. +0.1 N.D. N.D. -8.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X N.D. +0.1 N.D. N.D. -8.4
supernatant control Vogels_fungal_media; pH 5.5 N.D. +0.2 N.D. N.D. -8.3
nitrogen source Inosine (N) N.D. +0.4 N.D. N.D. -8.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X N.D. +0.3 N.D. N.D. -8.3
nitrogen source L-Arginine (N) N.D. +0.5 N.D. N.D. -8.2
carbon source L-Lactate (C) N.D. +0.5 N.D. N.D. -8.1
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