Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS11890	BWI76_RS11895	BWI76_RS11900	BWI76_RS11905	BWI76_RS11910
nitrogen source	Thymine (N)	+0.2	-1.8	-5.5	N.D.	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.0	-1.6	-4.2	N.D.	N.D.
nitrogen source	L-Arginine (N)	-0.5	+1.0	-5.6	N.D.	N.D.
nitrogen source	Glucuronamide (N)	-0.9	-2.7	-0.9	N.D.	N.D.
nitrogen source	D-Alanine (N)	-0.7	-2.6	-1.1	N.D.	N.D.
phage	KLEB20 MOI 0.1	+0.5	-0.3	-4.4	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4	+0.8	-5.2	N.D.	N.D.
phage	K. M5a1 KLEB22 MOI 10	+0.2	+0.1	-4.2	N.D.	N.D.
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.2	-0.1	-3.8	N.D.	N.D.
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.1	-0.0	-3.7	N.D.	N.D.
phage	KLEB17 MOI 1	+0.2	+0.3	-4.1	N.D.	N.D.
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.3	+0.5	-4.2	N.D.	N.D.
stress	Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL	+0.3	-1.1	-2.3	N.D.	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.1	-1.2	-1.7	N.D.	N.D.
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL	-0.2	-1.1	-1.6	N.D.	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	+0.1	-2.5	N.D.	N.D.
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.1	-2.4	-0.6	N.D.	N.D.
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.3	+0.5	-3.5	N.D.	N.D.
nitrogen source	nitrate (N)	-0.4	+1.1	-2.9	N.D.	N.D.
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.6	-0.7	-1.7	N.D.	N.D.
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.9	-0.3	-1.7	N.D.	N.D.
carbon source	pyruvate (C)	+0.3	+0.6	-1.9	N.D.	N.D.
carbon source	D-Sorbitol (C)	+0.6	+0.5	-1.8	N.D.	N.D.
nitrogen source	Glucuronamide (N)	+0.1	+1.1	-2.0	N.D.	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.8	-1.6	+1.1	N.D.	N.D.
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	+0.3	-1.0	+2.0	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	+1.8	-0.8	N.D.	N.D.
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	+0.7	-0.5	+2.2	N.D.	N.D.
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.3	-0.3	+3.2	N.D.	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	-0.0	+7.3	N.D.	N.D.