Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS11705	BWI76_RS11710	BWI76_RS11715	BWI76_RS11720	BWI76_RS11725
phage	K. M5a1 KLEB26 MOI 0.1	-0.9	-0.0	N.D.	-0.8	+0.1
nitrogen source	Uridine (N)	-0.3	+0.3	N.D.	-0.1	-1.0
nitrogen source	L-Arginine (N)	+0.8	-1.0	N.D.	-0.2	-0.3
phage	K. M5a1 KLEB23 MOI 10	-1.4	+0.5	N.D.	+0.1	+0.2
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-0.7	+0.8	N.D.	-0.2	-0.1
nitrogen source	Gly-DL-Asp (N)	+0.6	-1.2	N.D.	+0.0	+0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	-0.9	+0.3	N.D.	+0.6	-0.1
stress	Sisomicin 0.008 mg/ml	+0.4	-0.4	N.D.	-0.4	+0.5
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-0.6	-0.2	N.D.	+0.0	+1.0
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 0.5x	+0.5	+0.4	N.D.	+0.3	-0.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.6	+0.6	N.D.	+0.3	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	+0.6	N.D.	+0.3	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	+1.7	-0.1	N.D.	+0.4	-1.0
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.5	+0.7	N.D.	+0.2	-0.4
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.9	+0.3	N.D.	+0.4	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.6	+0.7	N.D.	+0.4	-0.5
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+1.1	+0.8	N.D.	+0.4	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5	-0.2	N.D.	+0.5	+0.6
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.4	+0.4	N.D.	+0.3	+0.6
stress	RCH2_defined_1percent_glucose with Chloride 600 mM	+0.5	+0.4	N.D.	+0.3	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.8	+0.2	N.D.	+0.4	+0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.5	+0.8	N.D.	+0.5	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.2	+0.6	N.D.	-0.3	+0.4
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	+0.6	+0.5	N.D.	+0.5	+0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.8	+0.5	N.D.	+0.4	+0.3
phage	KLEB1 MOI 10	+0.3	+0.7	N.D.	+0.3	+0.8
carbon source	Gly-Glu (C)	+0.5	-0.3	N.D.	+0.3	+1.7
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.6	+1.0	N.D.	+0.4	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.6	+0.7	N.D.	+0.5	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.6	+0.4	N.D.	+0.4	+1.4