Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS11675 and BWI76_RS11680 overlap by 4 nucleotidesBWI76_RS11680 and BWI76_RS11685 overlap by 4 nucleotidesBWI76_RS11685 and BWI76_RS11690 are separated by 12 nucleotidesBWI76_RS11690 and BWI76_RS11695 are separated by 349 nucleotides BWI76_RS11675: BWI76_RS11675 - arginine N-succinyltransferase, at 2,456,078 to 2,457,112 _RS11675 BWI76_RS11680: BWI76_RS11680 - succinylglutamate-semialdehyde dehydrogenase, at 2,457,109 to 2,458,587 _RS11680 BWI76_RS11685: BWI76_RS11685 - Succinylarginine dihydrolase (EC 3.5.3.23) (from data), at 2,458,584 to 2,459,909 _RS11685 BWI76_RS11690: BWI76_RS11690 - succinylglutamate desuccinylase, at 2,459,922 to 2,460,887 _RS11690 BWI76_RS11695: BWI76_RS11695 - ATP-independent periplasmic protein-refolding chaperone, at 2,461,237 to 2,461,719 _RS11695
Group Condition BWI76_RS11675 BWI76_RS11680 BWI76_RS11685 BWI76_RS11690 BWI76_RS11695
nitrogen source L-Arginine (N) -6.9 -6.1 -4.5 -2.0 +0.5
nitrogen source L-Arginine (N) -3.1 -3.7 -6.5 -2.6 -0.5
nitrogen source L-Lysine (N) -7.0 -2.7 +0.2 -2.0 -0.0
nitrogen source L-Lysine (N) -5.1 -3.9 -0.0 -2.3 -0.0
nitrogen source L-Citrulline (N) -3.6 -3.6 -2.7 -1.1 -0.2
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -1.5 -2.4 -1.4 -2.5 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -2.1 -0.7 -1.8 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -2.3 -1.2 -1.5 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.1 -1.1 -1.2 -0.8 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.1 -1.2 -1.7 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.9 -1.0 -1.4 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.5 -1.3 -1.6 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.5 -1.2 +0.1 +0.0
phage K. M5a1 KLEB26 MOI 0.1 -0.3 -2.3 -0.5 -1.0 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -1.4 -1.0 -1.3 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.8 -0.5 -0.9 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.8 -0.6 -1.5 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.1 -0.3 -1.6 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 -1.1 -1.2 -1.7 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.4 -0.4 -1.1 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.2 -0.8 -1.0 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 -1.7 -0.8 -1.4 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -1.5 -0.9 -0.7 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 -1.1 -0.9 -1.6 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 -0.8 -0.9 -2.0 +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -1.1 -0.7 -1.1 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 +0.8 +0.6 -1.5 -0.2
phage KLEB20 MOI 1 +1.5 -0.4 -0.7 -0.5 +0.7
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.4 +1.3 +0.5 +0.5 -0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +2.2 -0.2 +0.4 +0.6 +0.3
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