Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS11390 and BWI76_RS11395 overlap by 4 nucleotidesBWI76_RS11395 and BWI76_RS11400 are separated by 180 nucleotidesBWI76_RS11400 and BWI76_RS11405 are separated by 542 nucleotidesBWI76_RS11405 and BWI76_RS11410 are separated by 88 nucleotides BWI76_RS11390: BWI76_RS11390 - iron dicitrate transport regulator FecR, at 2,401,482 to 2,402,429 _RS11390 BWI76_RS11395: BWI76_RS11395 - RNA polymerase sigma factor FecI, at 2,402,426 to 2,402,947 _RS11395 BWI76_RS11400: BWI76_RS11400 - SAM-dependent methyltransferase, at 2,403,128 to 2,403,280 _RS11400 BWI76_RS11405: BWI76_RS11405 - lipid A biosynthesis acyltransferase, at 2,403,823 to 2,404,737 _RS11405 BWI76_RS11410: BWI76_RS11410 - leucine efflux protein, at 2,404,826 to 2,405,464 _RS11410
Group Condition BWI76_RS11390 BWI76_RS11395 BWI76_RS11400 BWI76_RS11405 BWI76_RS11410
phage KLEB1 MOI 0.1 -0.9 +0.1 -0.2 +0.1 -4.4
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x +0.2 -0.3 -0.5 +0.0 -3.6
stress Paraquat dichloride 0.1 mg/ml -0.5 -2.3 +0.4 +0.2 -1.0
phage K. M5a1 KLEB23 MOI 10 -0.8 -0.8 -0.0 +0.4 -1.9
nitrogen source Glucuronamide (N) +0.5 -0.9 -0.6 +0.1 -1.6
mixed community RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.6 +0.4 -0.8 +0.2 -1.4
phage K. M5a1 KLEB26 MOI 0.1 -0.5 -1.4 -0.7 -0.5 +0.9
stress Paraquat dichloride 0.1 mg/ml -1.1 -1.5 +0.4 -0.2 +0.3
nitrogen source Glucuronamide (N) -0.8 -1.3 +0.1 -0.2 +0.4
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.3 -0.3 -0.8 +0.1 -1.0
phage KLEB31 MOI 1 +0.4 -0.3 -0.2 +0.3 -2.0
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days +0.3 -0.5 -0.6 +0.2 -0.8
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM +0.6 -0.6 -0.6 -0.3 -0.4
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.1 -1.4 +0.3 -0.3 +0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.6 -0.9 -0.5 -0.4 +0.6
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.3 -0.7 -0.4 +0.4 +0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +1.0 -1.0 -0.1 -0.2 -0.2
stress perchlorate 100 mM -0.4 -0.8 -0.1 -0.0 +1.1
phage KLEB17 MOI 1 -0.7 +0.4 +0.4 +0.4 -0.6
nitrogen source D-Alanine (N) -0.2 -0.2 +0.9 +0.3 -0.9
phage KLEB29 MOI 1 +1.1 +0.0 +0.1 +0.0 -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -0.2 +0.3 -0.5 +1.6
carbon source D-Raffinose (C) +1.1 -0.8 -0.0 +0.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 +1.2 -0.2 -0.6 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +1.4 +0.2 -0.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +1.6 +0.4 -0.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.9 -1.1 +0.5 -0.1 +0.9
stress Sisomicin 0.008 mg/ml +0.3 +0.8 +0.6 +0.3 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.3 +0.5 -0.0 +0.5
stress Chlorite 2.5 mM +1.8 +2.2 -0.8 +0.2 -0.4
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